| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2754 |
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| Symbol | ffh |
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| ID | 4185893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3138014 |
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| End bp | 3139345 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638072744 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_679346 |
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| Protein GI | 110639137 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATA ATTTAAGTCA GAAGCTCGAT AAAGCATTTA AAACCCTAAA GGGCCAGGGT
AGAATTACAG AAATTAACGT TGCCACAACA GCTAAGGAAA TTCGCAAAGC CTTGATTGAT
GCCGATGTTA ACTATAAAGT AGCAAAGTCT GTAACCGATG ATATAAAAGA AATTGCCTTA
GGCAGAGAAG TACTTATTTC AGTTTCTCCG GGACAATTAC TTGTTAAAAT CACCCATGAA
GAGTTAACAA AGTTAATGGG TGGAGAAAAG CAGGAAATCA GCCTGAAAGG AGATCCTTCT
GTTATATTAA TTGCAGGTTT ACAAGGTTCG GGTAAAACAA CGTTTTCCGG GAAGCTTGCT
GCTTACATCA AAAAGCAGAA CAGAAATGTG TTGCTGGTTG CCTGTGATGT GTACAGGCCG
GCTGCCATTG ATCAGTTGAA GGTATTGGGT GAGCAGGTAG GTGTGGAAGT ATATACAGAA
CCTGACAATA AGAAGCCTGT TGAAATTTCA AAGAACGCAA TTGAATACGC TAAGAAAAAT
AATAAGAAAG TTGTAATCAT AGATACGGCC GGTCGTTTAG CGATAGACGA ACAGATGATG
AATGAAATTG CAGAAGTGAA GAAGGCAATA CAACCTTCAG AAACACTTTT TGTAGTCGAT
TCCATGACCG GCCAGGATGC GGTGAATACA GCAAAAGCAT TCAATGACCG CATTAATTTT
GACGGTGTTG TATTAACCAA ATTAGATGGG GATACCCGTG GTGGTGCTGC AATTTCTATT
CGTGCAGTAG TTGAGAAGCC AATCAAATTC ATCAGTACTG GTGAAAAAAT GGATGCACTT
GATGTGTTCT ATCCGGAACG TATGGCAAGC CGTATTCTGG GTATGGGTGA CGTTGTATCG
CTTGTAGAAC GTGCGCAGCA GGTATTTGAT GAAGAAGAAA CAAAGAAGTT AAATCAGAAA
TTAAGAAAGA ATCAATTCAA CTTTGAAGAT TTCTTAAATC AGATTCAGCA GATTAAAAAA
ATGGGTAGCA TCAAAGACCT TGTCGGTATG ATTCCGGGTA TGGGTAAAAT GATGAAAGAT
CTGCCGATTG ATGATGATGC ATTCAAACCG ATTGAAGCAA TCATTTTCTC TATGACAAAA
GAAGAACGGG AGAACCCGGA TCTGTTAAGC GGTAACAGAA GAAACAGAAT AGCAAAAGGG
TCTGGAACTT CTATTCAGCA AGTAAATAAC CTGTTGAAGC AATTTGAAGA CATGCGTAAA
ATGATGAAGA GCATGAACAA AATGCAGGGT AAAGGTATTC CGCCCAACAT GAAAAATTTA
ATGAAACGAT AA
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| Protein sequence | MFDNLSQKLD KAFKTLKGQG RITEINVATT AKEIRKALID ADVNYKVAKS VTDDIKEIAL
GREVLISVSP GQLLVKITHE ELTKLMGGEK QEISLKGDPS VILIAGLQGS GKTTFSGKLA
AYIKKQNRNV LLVACDVYRP AAIDQLKVLG EQVGVEVYTE PDNKKPVEIS KNAIEYAKKN
NKKVVIIDTA GRLAIDEQMM NEIAEVKKAI QPSETLFVVD SMTGQDAVNT AKAFNDRINF
DGVVLTKLDG DTRGGAAISI RAVVEKPIKF ISTGEKMDAL DVFYPERMAS RILGMGDVVS
LVERAQQVFD EEETKKLNQK LRKNQFNFED FLNQIQQIKK MGSIKDLVGM IPGMGKMMKD
LPIDDDAFKP IEAIIFSMTK EERENPDLLS GNRRNRIAKG SGTSIQQVNN LLKQFEDMRK
MMKSMNKMQG KGIPPNMKNL MKR
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