| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2716 |
|---|
| Symbol | engB |
|---|
| ID | 4185246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3103376 |
|---|
| End bp | 3103975 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638072706 |
|---|
| Product | ribosome biogenesis GTP-binding protein YsxC |
|---|
| Protein accession | YP_679308 |
|---|
| Protein GI | 110639099 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.042273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA ATGCAAAATT CATCAGTAGT TATGATGATT ATCAAAAATG TCCTGAAATA
ACGAAACCTG AATATGCATT TATTGGGCGC TCAAATGTGG GTAAATCATC GTTAATCAAT
TCGTTGACAG GAGTTAAGAA TCTGGCTATG ACCTCTTCCA AACCTGGTAA AACACAATTG
ATCAACCTGT TTACCATTGA GGAAACGTGG ATTCTGGCCG ATTTACCGGG GTATGGATTT
GCCAAAGCGA GCCAATCCAG CAGAATCAAA TGGGGCCGCA TGGTACATGA TTATCTGAAA
AACCGTACGA ACCTTACCAC CGTATTCTTA TTGGTAGATT CGCGGCATGA GCCAATGAAA
TCTGATCTGG AGCAGATTAC CTGGCTGGCG AGCAATGGTA TCCCGTTCAG TTTAATCTTT
ACTAAAATTG ATAAACAGTC TCTTACCCAA ACCAATAAGA TTCTGGCAAG CTGGACAAAA
GTTTTAAGTG AAAATTGGGA AGAATTACCT AAAATGTTTT TAACTTCTTC TGAATCCGGG
AAAGGTACAG AAGAACTGTT AACCTACATA GACGAAATCA ACAAACAGAT TGCAAATTAA
|
|---|
| Protein sequence | MKMNAKFISS YDDYQKCPEI TKPEYAFIGR SNVGKSSLIN SLTGVKNLAM TSSKPGKTQL
INLFTIEETW ILADLPGYGF AKASQSSRIK WGRMVHDYLK NRTNLTTVFL LVDSRHEPMK
SDLEQITWLA SNGIPFSLIF TKIDKQSLTQ TNKILASWTK VLSENWEELP KMFLTSSESG
KGTEELLTYI DEINKQIAN
|
|---|
| |