Gene CHU_2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2644 
Symbol 
ID4184766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3024841 
End bp3025533 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content42% 
IMG OID638072636 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_679238 
Protein GI110639029 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATTG CAGAATTAAA AAATGCTTCG AAAGAATATC AGATGGGAGA CCAGACCATT 
ACGGCGCTCC AATCAACAAA TTTCAAAGTA AACGATGGAG AACTTCTCCT GATCATCGGG
CCTTCCGGCT CAGGCAAAAC AACCCTGCTA TCCCTGATCG GTTGTGTTAT CTACCCAAGT
AAAGGTGAAC TTACCGTAGA TAATGAACAT GTGAATGGTA TGAGCCAAAG CCAGATGGCC
AGGCTTAGAC TGAACACAAT TGGTTTTGTA TTCCAGAATT TCAACCTTAT AGCTCCGTTA
AATGCATTTG ACAATGTGAT CCTTCCCTTG CAATTGCAGG GAGTAGCTTC AGGTGAGGCC
AAAGAACGCA CAGAGAAAGC ACTGGAAAAA GTAGGTATGC TGGATCGTAA AAAGAATTTA
CCCAAACAGC TATCCGGGGG GCAGCAACAA CGCATCGCCA TTGCACGTGC GCTTGTAACA
AATCCTAAAA TTATTTTATG TGATGAACCC ACAGCATCGC TGGATAAAGA TTCGGTAAGT
GTAGTAATGA ATGAATTAAA GTCGCTGGCA GAAAACGGGA AAGCTGTTGT GGTTGTTACA
CACGACCCGC GTTTAAAAGA ATATGCACAC CGGATTGTTG AAGTAAAAAA TGGAACGGTT
ACAGAACTAA CAGATTTAAA TCAAAACTTA TGA
 
Protein sequence
MVIAELKNAS KEYQMGDQTI TALQSTNFKV NDGELLLIIG PSGSGKTTLL SLIGCVIYPS 
KGELTVDNEH VNGMSQSQMA RLRLNTIGFV FQNFNLIAPL NAFDNVILPL QLQGVASGEA
KERTEKALEK VGMLDRKKNL PKQLSGGQQQ RIAIARALVT NPKIILCDEP TASLDKDSVS
VVMNELKSLA ENGKAVVVVT HDPRLKEYAH RIVEVKNGTV TELTDLNQNL