| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2570 |
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| Symbol | rhlE |
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| ID | 4186638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2947913 |
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| End bp | 2949253 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638072562 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_679165 |
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| Protein GI | 110638956 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.463423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTTC AAGATTTAAA ACTGATAGAC CCCATTTTGA AAGCACTTTC AGAAGAAGGC
TACACAACTC CCACTCCTAT TCAGTCTCAG GCTATTCCGT ATGTATTGCA AGGCAAAGAC
TTATTAGGCT GTGCACAAAC AGGAACAGGC AAAACAGCTG CTTTTTCAAT TCCTATTTTA
CAATTATTAA GTGTAAAGAA AAGTACGGAT CGTAAAAGAC CCATCCGAAG CCTTATTGTT
ACACCAACGC GTGAACTTGC TATACAAATC GGCGAAAGCT TACAGGCATA CGGAAAATAT
ACCGGATTAA CTTCTACCGT AATCTTTGGC GGTGTTAATC AAAGCCGTCA GGTTACAGCC
CTGCAAAACG GTATTGATGT ATTGGTTGCC ACTCCGGGCC GTTTACTGGA TCTGATGAAC
CAGGGTTTTA TTTCATTGCG CCACATTGAA ATATTTGTAC TCGATGAAGC CGACAGGATG
CTGGACATGG GTTTTGTACA TGATGTAAGA CGCCTGCTGC TTGCTTTGCC TGCCAAACGT
CAGTCGCTGT TCTTCTCTGC AACGATGCCT CCTGAAATTG TAAAACTTGC AGATAATATT
TTAGTAAATC CGTCAAAAGT AGAAGTAACC CCGGTTTCAT CTACAGCCGA TACAATCAAA
CAGTTCATGT ACTTTGTTGA CAGAGGAAAT AAAAACAATC TGTTGGTTGA AGTATTACAG
GATCCCAAAA TAAAAACCTG CCTTGTTTTC ACACGTACCA AACACGTTGC AGATAAAGTT
GTAAAAATGC TGGCGGAGCA TAAAATTAAA GCAGAAGCCA TCCACGGAAA TAAAAGTCAG
AATGCACGCC AGAATGCATT GACTAACTTC AAAGCACAAA CAACACGGAT ATTGGTTGCT
ACTGATATTG CAGCACGTGG TATTGACGTA GACAATTTAG AATTTGTGAT CAATTACGAA
ATTCCGAATA TTCCGGAAAC GTATGTACAC CGCATTGGTC GTACAGGCAG AGCGGGTGCA
AAAGGAACAG CTTTCTCTTT CTGCGATGCG GAAGAAAAAG CATATCTGAA AGATATTGAA
AAACTGATTT CAAAAAAGAT TCCTGTTATT GATGAACATC CGTATCCATT GATGGACCAC
AATCCGCCAA AGACACCACA AGGCCGCCAG CAGCGCCCTG CCTCATCATC ACGACCTAAG
GCAGCCTCCG GAGCAAACAG CGGAAGTTCA CGTGCAGGAA ATGCCGGCGG AAGCCAGCGC
AGCAGTGGTT CTTCTTCCCG CAGCGGAAGC AGTACAGGCA AAAAGAAATG GTATGGCAAA
TCCGGATCGA ATACTAAATA A
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| Protein sequence | MLFQDLKLID PILKALSEEG YTTPTPIQSQ AIPYVLQGKD LLGCAQTGTG KTAAFSIPIL
QLLSVKKSTD RKRPIRSLIV TPTRELAIQI GESLQAYGKY TGLTSTVIFG GVNQSRQVTA
LQNGIDVLVA TPGRLLDLMN QGFISLRHIE IFVLDEADRM LDMGFVHDVR RLLLALPAKR
QSLFFSATMP PEIVKLADNI LVNPSKVEVT PVSSTADTIK QFMYFVDRGN KNNLLVEVLQ
DPKIKTCLVF TRTKHVADKV VKMLAEHKIK AEAIHGNKSQ NARQNALTNF KAQTTRILVA
TDIAARGIDV DNLEFVINYE IPNIPETYVH RIGRTGRAGA KGTAFSFCDA EEKAYLKDIE
KLISKKIPVI DEHPYPLMDH NPPKTPQGRQ QRPASSSRPK AASGANSGSS RAGNAGGSQR
SSGSSSRSGS STGKKKWYGK SGSNTK
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