| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2535 |
|---|
| Symbol | cca |
|---|
| ID | 4186815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2918634 |
|---|
| End bp | 2920073 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638072528 |
|---|
| Product | tRNA adenylyltransferase (tRNA nucleotidyl transferase) |
|---|
| Protein accession | YP_679131 |
|---|
| Protein GI | 110638922 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTTGCA GAATGAATCT GAAAACGTCG ATTGAGAATA ATGTTCATAT CCGTGCGGTA
GCAGCTGCCG CCGATGAACT TGGACTCGAG ACATATATTG TAGGTGGCTA TGTGCGCGAT
CTGATCATGG ACCGCGATAA TAAAGATATT GATTTTGTTT GTCTGGGCAG CGGTATAGAG
CTGGCGCAGA AAGTAGCTGC AAATATGGGC GAACATGTGC AGGTGCATAT TTTTAAAACC
TTCGGAACGG CAATGATCAA TGCCGGCGAT ACGGAACTTG AATTTGTGGG AGCACGTAAA
GAGTCGTACG ATTTCAATTC GCGCAAACCC ACAGTAGAGA GCGGTACACT GGAAGATGAC
CAGCTGCGCC GTGATTTTAC CATCAATGCA TTGGCGATCT GCCTGAATAA AGCCCGTTTC
GGCGAGCTGG TAGATCCATT TGATGGTGTG AGTGATATTA AACGTAAAAT TATTAAAACA
CCGCAGGATG CCTTGCTGAC ATTCTCAGAC GATCCGCTGC GAATGATCCG TGCGGTCCGT
TTTGCTACCC AGCTGAACTT TGATATTGAA GCGGCAACCT TTCAGGCCAT CGCCACCAAT
AAAGATCGGT TAAGTATTGT TTCCATGGAA CGTATTTCGC AGGAATTGAA TAAAATCATT
TCGGCCCCTG TGCCTTCTTA CGGGTTTAAG CTGCTGTATA TTTCAGGTGT GTTAAAAGAC
ATCTTTCCGG AATTTGTGGC GCTGCATGGT GTGGAATCCA TCGATAATAA ATCACACAAG
GATAATTTCT ATCATACACT GCAGGTACTG GATAATGTGG CAAAAGTATC GGATGATCTG
TGGCTGCGCT GGGCAGCTAT TCTGCACGAT ATTGCAAAGC CTCTTACCAA ACGTTTTGTA
GAGCGTATCG GCTGGACATT CCACGGACAT GAAGATAAGG GCGCGCGAAT GGTGCCCGCT
ATTTTCAGAA AGCTCCGTCT GCCGTTAAAT GAAAAGATGG ATATGGTTGC GAAGCTGGTC
CGCCTGCATC TACGCCCGAT TTCTCTGGTG AAAGATGAAG TGACCGATTC TGCCGTACGC
AGGCTGATGT TTGAAGCAGG TGAACATTTT TCAGATCTTA TGATCTTATG CCGTGCCGAT
GTTACATCAA AGAACAATAA TAAAGTAAAG CGCTACCTTG AAAATTTTGA TAAGGTAGAA
CGCAAGGTTA TTGAAGTAGA AGAAAAAGAT CAGCAGCGTA ATTTCCAACC CGTAGTGAGC
GGCGAAGATA TTATGAAAAC ATTTGATATC AAGCCCGGAA AAGTAATCGG CGACATTAAG
GCTGATCTGA TTGAAGCCAT CCTGGAAGGC GATGTGCAGA ATGAATATGA GATTCTGTTT
CCGTTTATGA TAAATCTGGC GGAAAAGAAA TACGGACTCG TGAAACCGGA AACGCATTAA
|
|---|
| Protein sequence | MFCRMNLKTS IENNVHIRAV AAAADELGLE TYIVGGYVRD LIMDRDNKDI DFVCLGSGIE
LAQKVAANMG EHVQVHIFKT FGTAMINAGD TELEFVGARK ESYDFNSRKP TVESGTLEDD
QLRRDFTINA LAICLNKARF GELVDPFDGV SDIKRKIIKT PQDALLTFSD DPLRMIRAVR
FATQLNFDIE AATFQAIATN KDRLSIVSME RISQELNKII SAPVPSYGFK LLYISGVLKD
IFPEFVALHG VESIDNKSHK DNFYHTLQVL DNVAKVSDDL WLRWAAILHD IAKPLTKRFV
ERIGWTFHGH EDKGARMVPA IFRKLRLPLN EKMDMVAKLV RLHLRPISLV KDEVTDSAVR
RLMFEAGEHF SDLMILCRAD VTSKNNNKVK RYLENFDKVE RKVIEVEEKD QQRNFQPVVS
GEDIMKTFDI KPGKVIGDIK ADLIEAILEG DVQNEYEILF PFMINLAEKK YGLVKPETH
|
|---|
| |