| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2215 |
|---|
| Symbol | dcdA |
|---|
| ID | 4185775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2575669 |
|---|
| End bp | 2576148 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638072216 |
|---|
| Product | cytidine/deoxycytidylate deaminase (dCMP deaminase) |
|---|
| Protein accession | YP_678820 |
|---|
| Protein GI | 110638611 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2131] Deoxycytidylate deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAGA GACCGGATTT TGATGATATA TATATGGAAC TGGCCGTTAA TCTGGCCAAG
CGTTCGCATT GTATTAAAAG GCATGTAGGC GCTGTTTTAA CAAAGGATAC ACGCATCATA
TCCATCGGGT ATAACGGTCC GCCGGAAAAG ACGCACAACT GCGATGAAGA GTGGCCGGAA
GAAGGTTGTC CGCGTGATTC GAAAGGAAGC TGTTCCTTAG CTTTACATGC AGAAGAAAAT
GCGATTTTAT TTGCTGTTAA AAATGGCACA GAAGTAAAGG GAGCAACAAT TTATGTAACG
TTGTCTCCCT GTATTTCATG TGCACGTTTG TTGTTTGCGT CCGGTGTTAA AAAAGTTATT
TACCTGCACT CCTATGCCGA ATACAAAGGG CTTGACGTAG ATGAAGGCAA TGCTTTTTTG
TCAAAATTCG GTGTTGAAGT TCAAAAATAC TCCGGTGATT TTTCTATGAT ACATGAATGA
|
|---|
| Protein sequence | MYKRPDFDDI YMELAVNLAK RSHCIKRHVG AVLTKDTRII SIGYNGPPEK THNCDEEWPE
EGCPRDSKGS CSLALHAEEN AILFAVKNGT EVKGATIYVT LSPCISCARL LFASGVKKVI
YLHSYAEYKG LDVDEGNAFL SKFGVEVQKY SGDFSMIHE
|
|---|
| |