| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2185 |
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| Symbol | yiaD |
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| ID | 4183934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2539368 |
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| End bp | 2541452 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638072186 |
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| Product | outer membrane protein |
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| Protein accession | YP_678790 |
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| Protein GI | 110638581 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.138653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATGCTC AAAGCCCTTC ACTATTTTTC TTTGATGATT TTGAGACAAC CTCTAAAGGA
TGGTATGAAG GAGAAACAGA AAAATATTCT TTCAAAATTA CGAATGGCGG ATATCTCTGC
ACGAATAAAT CGGTATCCGG AGAAACATTC TGGTCAACCA ATTCAACGTA CCTGAATCCC
GATAAAGAAT TTACCTACCA GTTTAAAATA AAAGAGCTGG GTGGTTATGC CAGCGATGGT
GCAGGTATTT ATTTAAGCGC AGGAAACAAT AAATACTTTT ATTTTGTCAT CAATCCGGAA
CGGTTTGAAT ACGCGATTGC ATCCAGTGAA AATGGTAAAA ATACATTTCT GTATGAGTAT
TACGGATCAA ACACCAACAA ACGTACAGCT GCCATTAAAC CCAGAAATGT AACGAATACG
CTGGAAATTG CGCATAAAGG GAGTAACATA CTTTTCAGAT TGAACGATAC GGAATTATTA
TCGATTCCGT ATGCAGGCTC AGGTTTTGAA TCACTCACAG GCGTATTCGG AATTTTTATG
CGTACAAATA TGACTGTAGT TGTTGAAGAG GCAAGCTTAT ACCACGATGT GCAGATCAAA
ACGGTACCAA ACTTAACGAA CGGAATAAAA CGCGAAAACC TGGGTGCAAA CATCAACACA
ATCTATGCTG AAAAATTACC GTACATTGCT GCAGATGGTA AAACGCTTTA TTATTCCATA
CAGGGAAACC CTGCTAATAC AGGTGGTACA ATGGATGGTG ATGAAATCTA TGTAGCAACA
GCTGCCGCTG AGGGTAACTG GAACAAATCA ACAGCCATTG GCAAACCGTT AAATAATGCC
GGCCCAAATG CTGTTATTTC TGTAACTCCC GATAACAACA GTATGCTGAT TATGAATCAA
TATAATGCAG ATGGTACACA AAAAGGATCC GGTGTTTCAT TTTCATACCG CACGGAATCG
GGCTGGTCGG TGCCGGCAGA TGTTGTGATC AATAATTTTT ATAACCGTGC AAATACAAAT
GAATACTCCC TGTCTGCAGA TCGCAAAGTT TTATTCATGA CGTTACAGCG CGATGACAGC
AAAGGTGATA AAGATGTTTA TGTGAGTTTT TTACAAAAAG ACGGCAGCTT CAGCACACCT
TTAAATCTTG GGAGCCAGGT AAACACAAGC AAAGGAGAAC TGACTCCTTT TATTGCTGCA
GACGGTGTAA CACTTTACTT TGCAACATAC GGCCACCCTA CCTACGGCAG CGCCGATATT
TATATGACAC GCCGTTTGGA TTCAACGTAT ACAAATTGGT CTGAGCCTTT GAACCTCGGA
CCAGAGATCA ACTCAACAGC CTGGGATGCC TATTATTCAG TAGAGGCTTC GGGTAAATAT
GCCTACATGG TTACAGCAGA AAACTCCATT GGCGATATTG ATATTGTGCG CATTGCCTTG
CCGCAATCTG CAAAACCGAA ACCTGTTGTG CTGGTGTATG GCAAAGTATT ACATGCTACT
ACAAAACTAC CGTTGAAAGC AAACATTCAA TATGTAGATC TGGCAACAGG GAAAGAAATT
GGTATAGCAA CCAGCGATCC TAAAACAGGT GAATACAAAA TTGTTTTGCC AACAGGTGCA
AACTATGGTT TCCTGGCACA GAAAGAAAAC TTTTTCTCCG TATCAGACAA CATGGATCTG
AATGACCTGA AAGAATATAA GGAACTGGAA CGTAATTTAT ATTTAGCGCC CCTTATAACA
GGACAAACCA TCCGTTTGAA TAATTTGTTT TTTGATACCG GAAAAAGTGA TCTGCGCAAA
GAGTCTTATG CCGAATTAAA CCGTACGGTA GAATTAATGA AATTATACCT GACCATGACG
ATAGAAATTT CCGGCCATAC CGACAACGTT GGCGGCGATG CAGAAAATCA AACGCTCTCT
GAAAACAGAG CAAAAGCAGT TGTAAATTAT CTGGTTTCTC ACGGCATCGA TGCATCCCGT
GTGCAATCTA AAGGATATGG AAAAACTAAA CCTGTCTCTA CAAACGATAC AGACCACGGC
CGTCAGCTGA ACAGACGCGT TGATTTTACG ATTATAAAAA TGTAA
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| Protein sequence | MYAQSPSLFF FDDFETTSKG WYEGETEKYS FKITNGGYLC TNKSVSGETF WSTNSTYLNP
DKEFTYQFKI KELGGYASDG AGIYLSAGNN KYFYFVINPE RFEYAIASSE NGKNTFLYEY
YGSNTNKRTA AIKPRNVTNT LEIAHKGSNI LFRLNDTELL SIPYAGSGFE SLTGVFGIFM
RTNMTVVVEE ASLYHDVQIK TVPNLTNGIK RENLGANINT IYAEKLPYIA ADGKTLYYSI
QGNPANTGGT MDGDEIYVAT AAAEGNWNKS TAIGKPLNNA GPNAVISVTP DNNSMLIMNQ
YNADGTQKGS GVSFSYRTES GWSVPADVVI NNFYNRANTN EYSLSADRKV LFMTLQRDDS
KGDKDVYVSF LQKDGSFSTP LNLGSQVNTS KGELTPFIAA DGVTLYFATY GHPTYGSADI
YMTRRLDSTY TNWSEPLNLG PEINSTAWDA YYSVEASGKY AYMVTAENSI GDIDIVRIAL
PQSAKPKPVV LVYGKVLHAT TKLPLKANIQ YVDLATGKEI GIATSDPKTG EYKIVLPTGA
NYGFLAQKEN FFSVSDNMDL NDLKEYKELE RNLYLAPLIT GQTIRLNNLF FDTGKSDLRK
ESYAELNRTV ELMKLYLTMT IEISGHTDNV GGDAENQTLS ENRAKAVVNY LVSHGIDASR
VQSKGYGKTK PVSTNDTDHG RQLNRRVDFT IIKM
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