Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2159 |
Symbol | bcr |
ID | 4184721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2507925 |
End bp | 2509157 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638072159 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_678764 |
Protein GI | 110638555 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.832459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACATA CACAAAACCG ACACCTGATT ACACTTATCC TGGGCATGCT GGCAACCGTT TCTCCCTTTG CCATTGATTT TTATCTGCCT GCATTTTCAC AGATAGCAAA CGAACTGGGT ACAACTACAG CCCGTATCTC CCTTTCCGTT TCCAGTTATT TCATTGGGAT GGCGCTTGGT CAGCTGCTGT ATGGACCGCT GCTGGATCGC TTTGGAAGAA AGCCACCGCT TTATGCCGGT CTCATCATTT TCATTATTGC CAGCATCGGC TGTTGTTTTT CAACGGGTGT AGAAATGCTC ATTACACTCC GCTTTATACA GGCATTGGGA GGCAGTGTGG CAGGTGTGGC TGCAATGGCC ATGGTAAAAG ATTTCTTTCC GCCTGAACAG AACCACCGAA TCTTTGCCAT GCTTATATTA ACCATTGGTT TATCGCCATT GCTTGCGCCA AGCATTGGCG GTTTTGTTGC GACTGCTTTT AACTGGAAAT TTGTATTTGT GCTTTTAGCG TTGATTGCCT TATTTGCTAT AACGATTGTG TTTCTTTTTT TGCCGGAAGG GCAGGAGCCC GATAAGACTG TTACCTTACA GTTGAAACCT ATGGCGAAAA CGTATCTCTC TATTCTTTCA GATACACAGT TCTTCACGTA TACCATTTCA GGTGCTTTTG CCTTTGCATC CCTGTTTATT TATGTAGCCG GATCTCCAAT TGTATTTATT GATCTGTTTC ATGTAAGTAA GCAGATGTAC GGAGCAATTT TCGCATTCCT TTCTATTGGT TTTATTGGTG CCAGCCAGCT GAATATTTTA CTGGTACAAA AATTTTCCAG CGCTTCTATT TTCCGTTTTG CTATGCGGCT GCAGGTAGCA GCGGGTATGG TGTTTTCAAT CGTTGCCTGG AACGGATGGA TGGATCTGTA TACAACCATC CTGATGTTGT TTGTATTCCT GAGCTGCGTG GGGCTGATCA ACCCCAATGC TTCCGCACTG GCGCTTGCAC CGTTCACAAA GAATATAGGC AGTGCGGCTG CTATGATGGG CTGTTCGCAG ATCGGGATTG CGGCAGTAGC GTCTATTGCT GTCGGCATGT TTGATGCCGC AAGTGTGCTG CCTATGGTGC TGTCTATGTC TGCGACTGCG TGTATTGCAC TGGCATTACT GATGTGGGGA GAGAAGAAGA TGGCCGGCAA AATTGTTGCC GCAGATGCAA GTAAGGGTGT AGTGGTGCAT TGA
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Protein sequence | MRHTQNRHLI TLILGMLATV SPFAIDFYLP AFSQIANELG TTTARISLSV SSYFIGMALG QLLYGPLLDR FGRKPPLYAG LIIFIIASIG CCFSTGVEML ITLRFIQALG GSVAGVAAMA MVKDFFPPEQ NHRIFAMLIL TIGLSPLLAP SIGGFVATAF NWKFVFVLLA LIALFAITIV FLFLPEGQEP DKTVTLQLKP MAKTYLSILS DTQFFTYTIS GAFAFASLFI YVAGSPIVFI DLFHVSKQMY GAIFAFLSIG FIGASQLNIL LVQKFSSASI FRFAMRLQVA AGMVFSIVAW NGWMDLYTTI LMLFVFLSCV GLINPNASAL ALAPFTKNIG SAAAMMGCSQ IGIAAVASIA VGMFDAASVL PMVLSMSATA CIALALLMWG EKKMAGKIVA ADASKGVVVH
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