Gene CHU_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2159 
Symbolbcr 
ID4184721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2507925 
End bp2509157 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content46% 
IMG OID638072159 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_678764 
Protein GI110638555 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein
[TIGR00710] drug resistance transporter, Bcr/CflA subfamily 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.832459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACATA CACAAAACCG ACACCTGATT ACACTTATCC TGGGCATGCT GGCAACCGTT 
TCTCCCTTTG CCATTGATTT TTATCTGCCT GCATTTTCAC AGATAGCAAA CGAACTGGGT
ACAACTACAG CCCGTATCTC CCTTTCCGTT TCCAGTTATT TCATTGGGAT GGCGCTTGGT
CAGCTGCTGT ATGGACCGCT GCTGGATCGC TTTGGAAGAA AGCCACCGCT TTATGCCGGT
CTCATCATTT TCATTATTGC CAGCATCGGC TGTTGTTTTT CAACGGGTGT AGAAATGCTC
ATTACACTCC GCTTTATACA GGCATTGGGA GGCAGTGTGG CAGGTGTGGC TGCAATGGCC
ATGGTAAAAG ATTTCTTTCC GCCTGAACAG AACCACCGAA TCTTTGCCAT GCTTATATTA
ACCATTGGTT TATCGCCATT GCTTGCGCCA AGCATTGGCG GTTTTGTTGC GACTGCTTTT
AACTGGAAAT TTGTATTTGT GCTTTTAGCG TTGATTGCCT TATTTGCTAT AACGATTGTG
TTTCTTTTTT TGCCGGAAGG GCAGGAGCCC GATAAGACTG TTACCTTACA GTTGAAACCT
ATGGCGAAAA CGTATCTCTC TATTCTTTCA GATACACAGT TCTTCACGTA TACCATTTCA
GGTGCTTTTG CCTTTGCATC CCTGTTTATT TATGTAGCCG GATCTCCAAT TGTATTTATT
GATCTGTTTC ATGTAAGTAA GCAGATGTAC GGAGCAATTT TCGCATTCCT TTCTATTGGT
TTTATTGGTG CCAGCCAGCT GAATATTTTA CTGGTACAAA AATTTTCCAG CGCTTCTATT
TTCCGTTTTG CTATGCGGCT GCAGGTAGCA GCGGGTATGG TGTTTTCAAT CGTTGCCTGG
AACGGATGGA TGGATCTGTA TACAACCATC CTGATGTTGT TTGTATTCCT GAGCTGCGTG
GGGCTGATCA ACCCCAATGC TTCCGCACTG GCGCTTGCAC CGTTCACAAA GAATATAGGC
AGTGCGGCTG CTATGATGGG CTGTTCGCAG ATCGGGATTG CGGCAGTAGC GTCTATTGCT
GTCGGCATGT TTGATGCCGC AAGTGTGCTG CCTATGGTGC TGTCTATGTC TGCGACTGCG
TGTATTGCAC TGGCATTACT GATGTGGGGA GAGAAGAAGA TGGCCGGCAA AATTGTTGCC
GCAGATGCAA GTAAGGGTGT AGTGGTGCAT TGA
 
Protein sequence
MRHTQNRHLI TLILGMLATV SPFAIDFYLP AFSQIANELG TTTARISLSV SSYFIGMALG 
QLLYGPLLDR FGRKPPLYAG LIIFIIASIG CCFSTGVEML ITLRFIQALG GSVAGVAAMA
MVKDFFPPEQ NHRIFAMLIL TIGLSPLLAP SIGGFVATAF NWKFVFVLLA LIALFAITIV
FLFLPEGQEP DKTVTLQLKP MAKTYLSILS DTQFFTYTIS GAFAFASLFI YVAGSPIVFI
DLFHVSKQMY GAIFAFLSIG FIGASQLNIL LVQKFSSASI FRFAMRLQVA AGMVFSIVAW
NGWMDLYTTI LMLFVFLSCV GLINPNASAL ALAPFTKNIG SAAAMMGCSQ IGIAAVASIA
VGMFDAASVL PMVLSMSATA CIALALLMWG EKKMAGKIVA ADASKGVVVH