| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2119 |
|---|
| Symbol | |
|---|
| ID | 4184604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2465012 |
|---|
| End bp | 2465428 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638072119 |
|---|
| Product | thioesterase |
|---|
| Protein accession | YP_678724 |
|---|
| Protein GI | 110638515 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.06428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTAT GCCATGAAAC AGATGTGTTG GTTCGGTTCA GTGAAGTTGA TTCTTTACTG
ATTGTTTGGC ATGGGCATTA TGTACGTTAT TTCGAAGATG CGCGCGAAGC ATTCGGTTTA
AAATACGGCA TTCACTATCT GGATGTACAC CGCGCAGGTT ATTCCACACC GATTGTAAAA
GTAGTGTGTG ATTACAAGCG TTCGTTAAAA TATGGCGATA CCGCAATAGT GGAAGCTACT
TACGTGGATA CCGATGCAGC GAAACTTATC TTTAAATTTG TTATAAAAAA CAAAGCAACC
GGAGAACTTA TTGCCACGGG CGAAACCGTT CAGGTGTTCC TGGATTCTAA CAAAGAATTA
AGCTTAACCA TACCTCCGTT TCTTGTTGAA TGGAAGAAAA AACACGGACT GATCTGA
|
|---|
| Protein sequence | MTLCHETDVL VRFSEVDSLL IVWHGHYVRY FEDAREAFGL KYGIHYLDVH RAGYSTPIVK
VVCDYKRSLK YGDTAIVEAT YVDTDAAKLI FKFVIKNKAT GELIATGETV QVFLDSNKEL
SLTIPPFLVE WKKKHGLI
|
|---|
| |