Gene CHU_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2061 
SymbolxthA 
ID4185817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2410704 
End bp2411471 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content47% 
IMG OID638072061 
Productexodeoxyribonuclease III (exonuclease III) 
Protein accessionYP_678666 
Protein GI110638457 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.240867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.343531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG CTACATATAA TGTGAATGGA GTTAACGGAA GATTACCCGT GCTGCTACGT 
TGGCTGCAAG AAGCCAGACC AGATGTTGTT TGTTTACAGG AACTAAAAGC ACCGCAGGAA
AAATTTCCGG AAGAAGCGTT TCTGCAAGCC GGGTATCATG CAATCTGGCA CGGACAAAAA
AGCTGGAACG GTGTAGCCAT CCTTTCACGC AGCAGCGATA TCCGTGAGTT GCGCCGTGTA
TTACCCGGAG ACCCGGAAGA CAACCACAGC CGCTACATTG AAGCATTTGT AAATGGTATT
GTTATTGGTT GTCTGTATCT GCCCAACGGC AATCCTGCAC CGGGCCCTAA GTTTGATTAT
AAGCTGAAGT GGTTTAAGCG TTTAACGGCA CATGCAGCAG ATCTCATAGA AGCAGACATG
CCCATTGCAC TGATCGGAGA TTTTAATGTC ATGCCAACTG ATCTGGATGT ATATAAACCG
GAAAGCTGGA TTGATGATGC CTTGTTCCGT CCGGAAGTAC GCGCCGCATT TAAAAAACTT
ATGAAGCAAG GCTGGACAGA TGCCATCCGC AAACTGCATC CCGATGAAAA GATTTATACG
TTCTGGGATT ATTTTAGAAA TGCATACGGA CGCAATGCCG GCTTACGTAT TGATCATTTC
CTGCTAAGCC CTCCCCTGGC TGCCAAATTA AAAAAAGCCG GAGTAGACAA ACACGTACGC
GGGTGGGAAA AAAGCAGCGA CCACGCCCCC ACCTGGATTA TTCTGTAG
 
Protein sequence
MKIATYNVNG VNGRLPVLLR WLQEARPDVV CLQELKAPQE KFPEEAFLQA GYHAIWHGQK 
SWNGVAILSR SSDIRELRRV LPGDPEDNHS RYIEAFVNGI VIGCLYLPNG NPAPGPKFDY
KLKWFKRLTA HAADLIEADM PIALIGDFNV MPTDLDVYKP ESWIDDALFR PEVRAAFKKL
MKQGWTDAIR KLHPDEKIYT FWDYFRNAYG RNAGLRIDHF LLSPPLAAKL KKAGVDKHVR
GWEKSSDHAP TWIIL