Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2061 |
Symbol | xthA |
ID | 4185817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2410704 |
End bp | 2411471 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638072061 |
Product | exodeoxyribonuclease III (exonuclease III) |
Protein accession | YP_678666 |
Protein GI | 110638457 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.240867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.343531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CTACATATAA TGTGAATGGA GTTAACGGAA GATTACCCGT GCTGCTACGT TGGCTGCAAG AAGCCAGACC AGATGTTGTT TGTTTACAGG AACTAAAAGC ACCGCAGGAA AAATTTCCGG AAGAAGCGTT TCTGCAAGCC GGGTATCATG CAATCTGGCA CGGACAAAAA AGCTGGAACG GTGTAGCCAT CCTTTCACGC AGCAGCGATA TCCGTGAGTT GCGCCGTGTA TTACCCGGAG ACCCGGAAGA CAACCACAGC CGCTACATTG AAGCATTTGT AAATGGTATT GTTATTGGTT GTCTGTATCT GCCCAACGGC AATCCTGCAC CGGGCCCTAA GTTTGATTAT AAGCTGAAGT GGTTTAAGCG TTTAACGGCA CATGCAGCAG ATCTCATAGA AGCAGACATG CCCATTGCAC TGATCGGAGA TTTTAATGTC ATGCCAACTG ATCTGGATGT ATATAAACCG GAAAGCTGGA TTGATGATGC CTTGTTCCGT CCGGAAGTAC GCGCCGCATT TAAAAAACTT ATGAAGCAAG GCTGGACAGA TGCCATCCGC AAACTGCATC CCGATGAAAA GATTTATACG TTCTGGGATT ATTTTAGAAA TGCATACGGA CGCAATGCCG GCTTACGTAT TGATCATTTC CTGCTAAGCC CTCCCCTGGC TGCCAAATTA AAAAAAGCCG GAGTAGACAA ACACGTACGC GGGTGGGAAA AAAGCAGCGA CCACGCCCCC ACCTGGATTA TTCTGTAG
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Protein sequence | MKIATYNVNG VNGRLPVLLR WLQEARPDVV CLQELKAPQE KFPEEAFLQA GYHAIWHGQK SWNGVAILSR SSDIRELRRV LPGDPEDNHS RYIEAFVNGI VIGCLYLPNG NPAPGPKFDY KLKWFKRLTA HAADLIEADM PIALIGDFNV MPTDLDVYKP ESWIDDALFR PEVRAAFKKL MKQGWTDAIR KLHPDEKIYT FWDYFRNAYG RNAGLRIDHF LLSPPLAAKL KKAGVDKHVR GWEKSSDHAP TWIIL
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