| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2027 |
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| Symbol | troC |
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| ID | 4184552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2360200 |
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| End bp | 2361486 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638072030 |
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| Product | Mn2+/Zn2+ ABC transporter, permease |
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| Protein accession | YP_678635 |
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| Protein GI | 110638426 |
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| COG category | [K] Transcription
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components
[COG1321] Mn-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.23567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGAAT TAATCCGCTT CCTCCTGCTT GAAGACCCCA ACGTACGCAC CGTTGTGTTC
GGCACTATCC TGCTCAACCT GTCGGCTTCG GTAGTGGGGA CCTTTGCTTT TTTACAGAAG
AAAAGTCTTT CCGGTGATGC GGTAGCACAT TCTATCTTAC CGGGAATCTG CATCGCATTT
ATTGCCTTTC AAACAAAATC CCTGTGGGTA TTGCTGCCCG GCGCTTTTGT AACCGGCTGG
CTTTCCTTGT ATCTGGTAGA CCTGATTTCC CATCATTCAA AATTAAAACA GGACACCGCT
ATTGCCGTTG TGCTTTCTGT ATTCTTTGCT GTGGGCATCA TCTTATTAAC CTACATACAA
CATTCCGGAA GCGGCGCGCA AAGCGGACTG GATAGTTTTC TGTTTGGAAA AGCAGCAGCG
CTGTTAGAAA AAGACCTGCT TTCATATGCC ATTATCAGTA TGCTTGTTAT AAGCATTACT
GCATTTTTCT TTAAAGAATT TATGCTGATC AGTTTCGATG CTGTTTATGC AGGCAGTATT
GGTGTACCTG TACGCACATT ACAGCTGGTT TTAACAACCT TAACCGTTAT TTCCATTGTA
ACCGGAATAC AATCCGTTGG TGTTGTATTA ATGTCGGCCA TGCTCATCAC CCCTGCTGTA
GCAGCACGTT ACTGGACGGA TAATTTAAAA CGCCTCCTGC TGCTTGCCGT GTTGTTTAAT
ACGTTTGCCG CTATCATAGG CTCGTATATC TCCTACCGCT ACCCATCTAT GCCAACGGGC
CCGTGGATCG TGCTGGTGAT ATCCATGTTT GCGTTTGCAT CTATTCTGTT TGCTCCGAAG
AAAGGCATCG TGTACAGCAT GTATCGTGTA TTCAAACACA AATCGTTAAT CTTAAAGGAA
AACATTCTGA AAGCCTTATA TCAGTTAGGC GAACAGGAGA ATCGGTTTCA GGATACACAT
GCATTAAGTA ATCTGCTGGC AAAACGGAAT CTTCCGCTGT GGCAGGTATA CCCTGCTTTA
TACCGTTTGC GCTTTGAAGG TTATCTGCAG CATACAGGCG AAGGCTGGGC ACTTACAAAT
GAAGGCATCG AACGTGGAAA ACGTATCGTG CGTCTGCATC GCTTGTGGGA AATGTATCTA
TCAAAGAATT TGTTACTTCC ATCCGATCAC GTACACGATG ATGCTGAAAC CATTGAACAC
ATTCTTACAC CCGAACTGGA ATCGCGGCTG GAGAAAAGTT TAAACTTCCC GGAAGTAGAT
CCGCATGAAA AGAAAATACC ACGGTAA
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| Protein sequence | MKELIRFLLL EDPNVRTVVF GTILLNLSAS VVGTFAFLQK KSLSGDAVAH SILPGICIAF
IAFQTKSLWV LLPGAFVTGW LSLYLVDLIS HHSKLKQDTA IAVVLSVFFA VGIILLTYIQ
HSGSGAQSGL DSFLFGKAAA LLEKDLLSYA IISMLVISIT AFFFKEFMLI SFDAVYAGSI
GVPVRTLQLV LTTLTVISIV TGIQSVGVVL MSAMLITPAV AARYWTDNLK RLLLLAVLFN
TFAAIIGSYI SYRYPSMPTG PWIVLVISMF AFASILFAPK KGIVYSMYRV FKHKSLILKE
NILKALYQLG EQENRFQDTH ALSNLLAKRN LPLWQVYPAL YRLRFEGYLQ HTGEGWALTN
EGIERGKRIV RLHRLWEMYL SKNLLLPSDH VHDDAETIEH ILTPELESRL EKSLNFPEVD
PHEKKIPR
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