Gene CHU_2026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2026 
Symbol 
ID4184551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2359270 
End bp2360055 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content45% 
IMG OID638072029 
ProductMn/Zn ABC transporter, ATP-binding protein 
Protein accessionYP_678634 
Protein GI110638425 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.237224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAC ACGTTGAAAA CCCGGTAGTG GAAATACATG ACCTGACGGT AAGTTATTCA 
AAACGTCCGG TTTTATGGAA CATTGACCTT ACCATACCCA AAGGTGTACT GGCAGGGATC
ATCGGACCGA ATGGTGCCGG TAAATCTACC CTGATCAAAA CTGCAATGGG TCTGATTCCA
AAAGCCAGCG GCTATGTAAA ATTATTTGAT CAGGATCTGG AATTGATCCG GAAAAAAGTA
AGCTATGTAC CGCAGCGCGA ATCCGTTGAC TGGGACTTTC CGGCTTCGGC ACTTGACGTT
GTGTTAATGG GCAGGTATGG ACATGCAGGC ATTTTCAAAT CACTGCGCCA GGCCGATAAA
GAAGTAGCGA CCGAGTGCCT GCGTAAAGTA GGTATGGAAG CTTTTGCAGA CAGACAGATT
TCTCAGCTTT CAGGCGGGCA GCAGCAGCGT GTTTTCCTTG CGCGCGCACT GGCACAGGAT
GCGGACTTGT ATTTTATGGA CGAGCCATTT GCCGGTGTGG ATGCTTCTAC CGAAAAAACG
ATCATTGCCT TATTAAAAGA AATGACAGCA AAAGGAAAAA CGATCATTGT GGTACATCAT
GACCTGAACT CTGCCGACGA ATATTTTGAT TGGATCTTAT TATTGAATAC ACGGCTTATT
GCCAGCGGAC CAACACAAAA AGTATTTACA AAAGAACTGC TTCAGAAAAC ATACGGCGGC
AAGCTCAACA TCCTATCCAG TGTAGGTGAC CTGCTGCACA AAGAACAGTT TCCAAACAGA
GAATAA
 
Protein sequence
MIEHVENPVV EIHDLTVSYS KRPVLWNIDL TIPKGVLAGI IGPNGAGKST LIKTAMGLIP 
KASGYVKLFD QDLELIRKKV SYVPQRESVD WDFPASALDV VLMGRYGHAG IFKSLRQADK
EVATECLRKV GMEAFADRQI SQLSGGQQQR VFLARALAQD ADLYFMDEPF AGVDASTEKT
IIALLKEMTA KGKTIIVVHH DLNSADEYFD WILLLNTRLI ASGPTQKVFT KELLQKTYGG
KLNILSSVGD LLHKEQFPNR E