| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2022 |
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| Symbol | dapD |
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| ID | 4184547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2355354 |
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| End bp | 2356163 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638072025 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_678630 |
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| Protein GI | 110638421 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA TTATTGAAAA AGCGTGGGAA GATCGTTCAT TGCTTTCCAC TTCAGAAGTA
CAGAATACAA TTAATGCAGT TATTGAAGAG TTGGATAAGG GCCGTTTGCG TGTTGCTCAA
CCAAATGAAG ATGGCAGCTG GACAGTAAAT GACTGGGTAA AAAAGGCCGT GATTATGTAT
TTCCCGATCC GGAAAATGGA AACCATTGAA TGTGGTCCGA TGGAGTTTTA TGACAAAATG
GCGTTAAAAA CAGGGTACGA AGCATTGGGG GTCCGAGTGG TTCCGCATGC TGTTGCACGT
TATGGCGCAT ACCTGGCAAA GGGGACAATC CTTATGCCTT CTTATGTAAA TATCGGTGCT
TATGTAGATT CAGGTACCAT GGTTGATACC TGGGCAACGG TTGGCAGCTG CGCGCAGATC
GGTAAAGATG TACATTTGAG TGGTGGTGTT GGTATTGGCG GTGTATTAGA GCCTGTACAG
GCAGCTCCTG TAATTATTGG TGATGGTGCT TTTTTAGGGT CCAGATGTAT TGTCGTTGAG
GGAGTTAGAG TTGGGAAAGA AGCGGTATTA GGTGCTAATG TTGTTTTAAC AGCAAGCTCT
AAAATTATAG ATGTCACTGG TCCTGAACCT GTAGAATATA AAGGTTTTGT TCCGGAACGT
TCCGTTGTTA TTCCGGGTAC TATTCCGAAA GAATTTGCTT CAGGTACATA CCAGGTCCCA
TGTGCCTTAA TCATTGGCAA AAGAAAACCA AGTACAGATT TGAAGACATC GTTGAATGAT
GCGTTAAGAG AAAACAACGT AAGCATATAA
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| Protein sequence | MKEIIEKAWE DRSLLSTSEV QNTINAVIEE LDKGRLRVAQ PNEDGSWTVN DWVKKAVIMY
FPIRKMETIE CGPMEFYDKM ALKTGYEALG VRVVPHAVAR YGAYLAKGTI LMPSYVNIGA
YVDSGTMVDT WATVGSCAQI GKDVHLSGGV GIGGVLEPVQ AAPVIIGDGA FLGSRCIVVE
GVRVGKEAVL GANVVLTASS KIIDVTGPEP VEYKGFVPER SVVIPGTIPK EFASGTYQVP
CALIIGKRKP STDLKTSLND ALRENNVSI
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