Gene CHU_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2017 
Symbol 
ID4184542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2350804 
End bp2351409 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content40% 
IMG OID638072020 
Producthypothetical protein 
Protein accessionYP_678625 
Protein GI110638416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.991999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAG TAAAAACAAA AAGACACAGC ATTTCTCTTG ACATGACTGC CATGTGTGAT 
ATGGCATTCC TGTTACTGAC CTTCTTCATC CTTACCGCGA AGATGAAGGT ACCTGAGCCC
GCTCAGTTTG ATGTGCCATC GTCTGTATCT ACTCAGAAAT ACGAAGAGAA GGATCTGATC
CGTATCTCCA TCAGTAATGA TGACCGTATT TTCCTTACGA TACCGGATCA GACATTACGC
AGAGAAATGA TTGATGCCTA TGCAAATACC TTTAAAGTAA ACTTAACACC TAAGCAAAAA
GAAGCTTTTG AGTTAACGGA AACCTTTGGT ATGCAAAAAG CAGATTTAGT TTCGTATCTG
GCACAATCTA CAGAAATAAG AAAGAATTTT CCTCAAACAG GAATTCCTGC AGATTCAACC
AACAATGAAC TGGAACAGTG GATCGCAACA GCAACAGGAG TAAGGCCTGA GCTTACAATC
GCGATCAAAG GCGATAAAGA TGCAAACTAT AACAAGTTTG GAGAAGTAAT CGCTACCCTT
AAGAAAAGAA GAATTTATGC GTTTAGTCTG GTTACAACAC TGGAAGCTAA ACCGGCAAAC
TTATAA
 
Protein sequence
MSKVKTKRHS ISLDMTAMCD MAFLLLTFFI LTAKMKVPEP AQFDVPSSVS TQKYEEKDLI 
RISISNDDRI FLTIPDQTLR REMIDAYANT FKVNLTPKQK EAFELTETFG MQKADLVSYL
AQSTEIRKNF PQTGIPADST NNELEQWIAT ATGVRPELTI AIKGDKDANY NKFGEVIATL
KKRRIYAFSL VTTLEAKPAN L