Gene CHU_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2007 
SymbolydgJ 
ID4187108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2342229 
End bp2343239 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content44% 
IMG OID638072010 
Productoxidoreductase 
Protein accessionYP_678615 
Protein GI110638406 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0414834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAA GAATTAAAAC AGCCTTAGCA GGTTTTGGGA AAGCAGGAGA ATTTTTACAT 
GCTCCCTTTA TTCATACCGA TAAATCATTT GAATTAGCTG TTATTTTAGA ACGTACACCG
CTTAAAGCAG CACAGGCATA TCCGCAGGCA AAGATTGTTC GTACGTTTGA AGAAATCTGC
GCAGATCAAT CCATAGAATT AATTGTATGT GCAACACCGA ATGATACCCA CGCAGGTTTT
GCAGAACAGG CATTACTCGC AGGTAAACAT GTAGTAGTCG ATAAACCGTT CACCGTTCAT
CTGGAAGATG CTATCCGGCT GCAGGAACTT TCCTTAAAAG TGAAGAAACA TATTTTTGTA
TATCAGAACA GGAGATGGGA CGGCGACTTT TTAACGGTCA AAAAGATACT GACAGAAGGT
GTACTGGGAG ATGTATTAAC AATTGAATCG CGGTTTGACC GCTACCGTCC GCAACCCCGC
ATTAATTACT GGAAAGAGTC AGATGCACCG GGTAATGGTT TGTGGTACGA TCTGGGCCCC
CATCTGATGG ATCAGGCATT TCAGCTATTG GGGAAACCTA AAAAATGCGA AGCTACCATT
AAAAAACAAC GGGAGGGCAG CATTGGCATT GATTACTTTG ATGTTGAATT TGCATACAAT
AAAATTGCCT ACCGTATCCA TGCAGGCATG CTGGAGAAAG AGCGCACACC GCGGTGGAGG
ATTATCGGCA ATAAAGGAAC GTATACAAAA TATGGGGTTG ATCCGCAGGA AGCAAAGCTG
AATAGCGGAC AGCAGCCGGA AGGTACAGAC TGGGGCAAAG AAGATATACT TGACTTCGGA
AAGATCAATT TCTTAGATGG GCGTTCTGTC GTGTATCCAA CGCTTCCGGG AGATTACCGC
AAATTTTATG CAGGTGTGTT CGAAACCATA CGAAATGATG CGCCACTTCT TATCTCAATG
AGTGATGCAG TTGAACTGGT TGCCTGGCTA GAGAAACTGG CAACAGATTG A
 
Protein sequence
MSKRIKTALA GFGKAGEFLH APFIHTDKSF ELAVILERTP LKAAQAYPQA KIVRTFEEIC 
ADQSIELIVC ATPNDTHAGF AEQALLAGKH VVVDKPFTVH LEDAIRLQEL SLKVKKHIFV
YQNRRWDGDF LTVKKILTEG VLGDVLTIES RFDRYRPQPR INYWKESDAP GNGLWYDLGP
HLMDQAFQLL GKPKKCEATI KKQREGSIGI DYFDVEFAYN KIAYRIHAGM LEKERTPRWR
IIGNKGTYTK YGVDPQEAKL NSGQQPEGTD WGKEDILDFG KINFLDGRSV VYPTLPGDYR
KFYAGVFETI RNDAPLLISM SDAVELVAWL EKLATD