Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2007 |
Symbol | ydgJ |
ID | 4187108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2342229 |
End bp | 2343239 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638072010 |
Product | oxidoreductase |
Protein accession | YP_678615 |
Protein GI | 110638406 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0414834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAA GAATTAAAAC AGCCTTAGCA GGTTTTGGGA AAGCAGGAGA ATTTTTACAT GCTCCCTTTA TTCATACCGA TAAATCATTT GAATTAGCTG TTATTTTAGA ACGTACACCG CTTAAAGCAG CACAGGCATA TCCGCAGGCA AAGATTGTTC GTACGTTTGA AGAAATCTGC GCAGATCAAT CCATAGAATT AATTGTATGT GCAACACCGA ATGATACCCA CGCAGGTTTT GCAGAACAGG CATTACTCGC AGGTAAACAT GTAGTAGTCG ATAAACCGTT CACCGTTCAT CTGGAAGATG CTATCCGGCT GCAGGAACTT TCCTTAAAAG TGAAGAAACA TATTTTTGTA TATCAGAACA GGAGATGGGA CGGCGACTTT TTAACGGTCA AAAAGATACT GACAGAAGGT GTACTGGGAG ATGTATTAAC AATTGAATCG CGGTTTGACC GCTACCGTCC GCAACCCCGC ATTAATTACT GGAAAGAGTC AGATGCACCG GGTAATGGTT TGTGGTACGA TCTGGGCCCC CATCTGATGG ATCAGGCATT TCAGCTATTG GGGAAACCTA AAAAATGCGA AGCTACCATT AAAAAACAAC GGGAGGGCAG CATTGGCATT GATTACTTTG ATGTTGAATT TGCATACAAT AAAATTGCCT ACCGTATCCA TGCAGGCATG CTGGAGAAAG AGCGCACACC GCGGTGGAGG ATTATCGGCA ATAAAGGAAC GTATACAAAA TATGGGGTTG ATCCGCAGGA AGCAAAGCTG AATAGCGGAC AGCAGCCGGA AGGTACAGAC TGGGGCAAAG AAGATATACT TGACTTCGGA AAGATCAATT TCTTAGATGG GCGTTCTGTC GTGTATCCAA CGCTTCCGGG AGATTACCGC AAATTTTATG CAGGTGTGTT CGAAACCATA CGAAATGATG CGCCACTTCT TATCTCAATG AGTGATGCAG TTGAACTGGT TGCCTGGCTA GAGAAACTGG CAACAGATTG A
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Protein sequence | MSKRIKTALA GFGKAGEFLH APFIHTDKSF ELAVILERTP LKAAQAYPQA KIVRTFEEIC ADQSIELIVC ATPNDTHAGF AEQALLAGKH VVVDKPFTVH LEDAIRLQEL SLKVKKHIFV YQNRRWDGDF LTVKKILTEG VLGDVLTIES RFDRYRPQPR INYWKESDAP GNGLWYDLGP HLMDQAFQLL GKPKKCEATI KKQREGSIGI DYFDVEFAYN KIAYRIHAGM LEKERTPRWR IIGNKGTYTK YGVDPQEAKL NSGQQPEGTD WGKEDILDFG KINFLDGRSV VYPTLPGDYR KFYAGVFETI RNDAPLLISM SDAVELVAWL EKLATD
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