Gene CHU_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1999 
Symbol 
ID4187100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2335259 
End bp2335858 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content39% 
IMG OID638072002 
ProductCBS domain-containing protein 
Protein accessionYP_678607 
Protein GI110638398 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.617912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGAA AAAAACTACA TAGAGGTATG CGCCTTTCAA GGTATGTTCT TTATAAAGAA 
ACCTTAGTCG ATTACAAAGA AAATTTCTGG TCATTTATTG GAGCATTTGT CGGGATCGGA
TTGATTGGTT TTTTGCAGAG TAAAATTGTT ACAGATATTG AAAATGTATT TTTGATTGGT
TCTTTTGGTG CAACCAGTGT ACTTGTATTC GGAGCCATTC AAAGCCCGTT ATCGCAGCCG
CGTAATTTAA TCGGGGGGCA TGTTATTTCA GCTGTTGTTG GTGTAACGGC GTATAAATTA
TTTCCGGATA TGCTTTGGAT TTCCGCTCCC TTTGCTGTTT CATTTTCCAT TGTGCTCATG
CAGATCACAA AAACGCTGCA TCCTCCAGGC GGCGCTACGG CATTAATTGC TGTAATCGGT
TCTGAAAAAA TAAAACATCT TGGCTATTGG TATGTGTTAA GTCCGGTATT AACAGGTTGT
TTCATTATGC TTGTTGTAGC ATTGATCTTT AACAACATGA CCTCCCACAG AAGTTATCCT
ACCGACAAAC GGTATACAAA GGTGATCAAA CGATTCTTTG CCGGCGAGAA AAGATTGTAG
 
Protein sequence
MIRKKLHRGM RLSRYVLYKE TLVDYKENFW SFIGAFVGIG LIGFLQSKIV TDIENVFLIG 
SFGATSVLVF GAIQSPLSQP RNLIGGHVIS AVVGVTAYKL FPDMLWISAP FAVSFSIVLM
QITKTLHPPG GATALIAVIG SEKIKHLGYW YVLSPVLTGC FIMLVVALIF NNMTSHRSYP
TDKRYTKVIK RFFAGEKRL