| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1987 |
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| Symbol | covS |
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| ID | 4186078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2319918 |
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| End bp | 2321651 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638071990 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_678595 |
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| Protein GI | 110638386 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA AAACAAAACT GACCTTAGGT GTTGGATTAT TATTTCTCCT AATCATTTTA
TTAAGTGCTG TTGGAACCAG ATACATCAAT GCATTAAAGT CAGATACGGA AAATATTTTA
GTTGCAAACT ACAACTCTTT GGAGTACGCA CGCTTCATGT TAAGTTCGTT AGAAGAACAA
AGTTCTCAAG CCATTTCTAC ATTCGAAAAT AACTTAACAA AGCAGGAAGC AAATCTAACA
GAAACAGGAG AAAAAAACAT TACTACAGAA ATACGAAATC AGTATAACCG ATATAAAATC
AATAGATCAG ACAGTACCTT ATTGCCACAG ATCCGACATG GCATTTATAA AATAATGGAT
CTGAATATGC AGGGAATTCA AAGGAAAAGT GAAATTGCAA AATCTACCGC CAACAAAGCG
ATCTTCTGGA TTGCTGTTAC GGGAACACTC TGCTTTGTGA TTGCATTCAC CTTATTGATC
AATTTACCTT CCAACATTGC AAATCCGATC AAAGAACTTA CCGAAAGTAT TCAACAGATC
GCTGAAAAAA AATATTCCGA ACGCGTACAT TTTGAAGGTC ATAATGAATT TGGTGAACTT
GCCAAATCTT TCAATACGAT GGCTGAAAAA TTAGAAGAAT ACAACAGCAG CAACCTTGCT
AAGCTGATGA TGGAGAAAAA ACGTATTGAA AGCCTCATTA ACAATATGTA TGACCCCGTC
ATTGGCCTGG ATGAAAATCT AAAAATACTT TTTGTTAATG AACAAGCGAT CAAAATCATT
GGCATTTCTC AGGAGGAACT TATCGGACAC TATACACAGG AACTGGCAAT AAAAAACGAT
CTCGTACGCA CTCTTGTACA AGATCTGATG GTGGCTGAAA ACACACCATC AAATAAAGCC
ATACCTATTA AAATTTATTC AAATAATAAA GAAGGCTATT TTGAAAAAGA GATTCTGCAC
ATCTCCGTTA CTCCTACCGG TGAGCAAGTA AAACAATTGA TCGGTCATGT TATTATACTG
CGGAACATTA CAGAATATAA GGAATTGGAT TTTGCCAAAA CAAATTTCAT TGCCACCGTT
TCGCACGAAT TCAAAACACC TATCTCTTCC ATTAAAATGA GTTTGCAATT GCTGGAAAAC
AAACAGATCG GCATGCTCAA TGAAGAACAG CAAAATCTAT TGGAAAGTAT TAAAGAAGAT
GCGAATCGTT TGCTTAAGAT AACAGGTGAG CTTTTAAATA TGACACAGGT TGAAAGCGGA
AACATTCAAT TATCTATTCT GCCGAATGAT CCAAAGGAAA TTTTATTTTA TGCCATCAAT
GCCACAAAAA CACAAGCCGA ACAGAAAAAC ATCTCACTTA AAATTACTGC TCCGGACAAC
ATACCGCATG TACTGGCCGA CAATGAAAAA ACAGCGTGGG TGCTTATCAA CCTATTATCC
AATGCCATTC GCTATTCGTA CGACAATTCT ACCATTCAAT TAGCAATTGC ATCGCGTGAT
AATAAGGTAA CGATATCTGT AAAAGATACC GGACAAGGCA TTGCGTCTCA ATACAAAGAC
AAAATATTCA ACCGATACTT TCGTGTACCC GGAACAAAAA AAGAAGGTAC CGGACTTGGC
TTAGCCATCA GCAAAGAATT TATAGAAGCA CAAGGCGGCT CCATCTCCGT TGATAGTGAA
TTCGGGAGCG GCAGTACGTT TACGATTGGG TTGTTAGTGG CCGGCGGACA GTAG
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| Protein sequence | MKIKTKLTLG VGLLFLLIIL LSAVGTRYIN ALKSDTENIL VANYNSLEYA RFMLSSLEEQ
SSQAISTFEN NLTKQEANLT ETGEKNITTE IRNQYNRYKI NRSDSTLLPQ IRHGIYKIMD
LNMQGIQRKS EIAKSTANKA IFWIAVTGTL CFVIAFTLLI NLPSNIANPI KELTESIQQI
AEKKYSERVH FEGHNEFGEL AKSFNTMAEK LEEYNSSNLA KLMMEKKRIE SLINNMYDPV
IGLDENLKIL FVNEQAIKII GISQEELIGH YTQELAIKND LVRTLVQDLM VAENTPSNKA
IPIKIYSNNK EGYFEKEILH ISVTPTGEQV KQLIGHVIIL RNITEYKELD FAKTNFIATV
SHEFKTPISS IKMSLQLLEN KQIGMLNEEQ QNLLESIKED ANRLLKITGE LLNMTQVESG
NIQLSILPND PKEILFYAIN ATKTQAEQKN ISLKITAPDN IPHVLADNEK TAWVLINLLS
NAIRYSYDNS TIQLAIASRD NKVTISVKDT GQGIASQYKD KIFNRYFRVP GTKKEGTGLG
LAISKEFIEA QGGSISVDSE FGSGSTFTIG LLVAGGQ
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