| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1958 |
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| Symbol | phrB |
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| ID | 4186981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2288230 |
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| End bp | 2289531 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638071961 |
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| Product | deoxyribodipyrimidine photolyase (photoreactivating enzyme) |
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| Protein accession | YP_678566 |
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| Protein GI | 110638357 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0021636 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGAAG TTGTAGTTTT TTGGTTTCGC AGAGATTTAC GGTTAACAGA TAATGCTGGA
TTATTTCAGG CTTTAACAAG CGGTTATGCC GTTTTACCTG TATTCATATT TGATATCAAC
ATACTGAATG CACTGGAACA TAAAAATGAT GCGCGTGTTG AGTTTATTCA CGATACCATT
CAATCGCTTA AAAATGAGTT GCAGAAAATA CATTCCGATA TGGAAGTATA TCACGCAACA
CCTGCAGAAG CGTTTGAACA GCTGGTAAAA AAATATACTG TTAAAGCCAT TTATACCAAT
ACGGATTATG AACCTGCGGC AATTAAGCGG GACAATGAAA TAAGCGATTG GGCAGCGCAG
CAGCAGATAG CTTTCAAATC ATTTAAGGAT CAGGTAATTT TTGAAAAGAA TGAAATACTG
ACCGATACAG GTGCGCCTTA CCGCGTATAC ACACCTTACA AAAATAAGTG GTTAAAGAAA
TTAACTGAAA ATCCGGTTAC GCACTCCCCT TCCGAAAAAC ATACCGATGC TTTTCTTCGT
ATGGAAGCCA AACCAATTGT GACTCTCAAA CAACTTGGTT TCACACCTTC ATCCATTCAG
ATACCGCCGT TAGAAACCCT GCGTAAGACC ATTCAGGAAT ACGATAAAAC CAGAGACTAC
CCGTACCTGG AACATGGCAC CTCTTTATTG GGTATACACT TCAGGTTTGG GACCATCAGT
ATCCGGGAAA AAGTGGTTAA AGCATTGCCG TTGAATGCAA CATGGCTGAG CGAATTGATC
TGGCGCGAGT TCTTTATGCA GCTGCTGTTT CATTTCCCTC ATGTAGTAAC CGAATCGTTT
CAGTCAAAAT TCAACCGCTT GGAATGGCGT TACTCTCAAG CCGATTTTGA AAAATGGTGT
ACGGGCAAAA CCGGATACCC ACTGGTAGAT GCAGGCATGC GGGAGTTGAA TACTACCGGC
CACATGCATA ACCGCGTACG TATGGTTGTT GCCAGTTTTT TAACGAAACA TTTGTTTATT
GACTGGCGCT GGGGGGAAGC ATATTTCGCA CAAAAATTAC TGGACTACGA TCTGTCTGCA
AATAACGGAA ACTGGCAGTG GGCAGCCGGA ACAGGCGCAG ATGCGCAACC GTATTTCCGC
ATATTCAATC CGATTTCACA ACAGGAGAAA TTTGATCCCG ATTTTATTTA TATAAAAAAA
TGGGTGCCTG AGTTTGGAAC TTCTTCGTAT ATTGAACCTA TAATCGAACA TAAAAAAGCA
ACAGAACGGG CAAAACTGCT TTTTTCTGTA TTAAAAAATT AA
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| Protein sequence | MNEVVVFWFR RDLRLTDNAG LFQALTSGYA VLPVFIFDIN ILNALEHKND ARVEFIHDTI
QSLKNELQKI HSDMEVYHAT PAEAFEQLVK KYTVKAIYTN TDYEPAAIKR DNEISDWAAQ
QQIAFKSFKD QVIFEKNEIL TDTGAPYRVY TPYKNKWLKK LTENPVTHSP SEKHTDAFLR
MEAKPIVTLK QLGFTPSSIQ IPPLETLRKT IQEYDKTRDY PYLEHGTSLL GIHFRFGTIS
IREKVVKALP LNATWLSELI WREFFMQLLF HFPHVVTESF QSKFNRLEWR YSQADFEKWC
TGKTGYPLVD AGMRELNTTG HMHNRVRMVV ASFLTKHLFI DWRWGEAYFA QKLLDYDLSA
NNGNWQWAAG TGADAQPYFR IFNPISQQEK FDPDFIYIKK WVPEFGTSSY IEPIIEHKKA
TERAKLLFSV LKN
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