| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1957 |
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| Symbol | gcp |
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| ID | 4186446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2282638 |
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| End bp | 2283669 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071959 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_678564 |
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| Protein GI | 110638356 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.31198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0187991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGTGATC AATCTATGTC AGTTACACTA TTAGCCATCG AATCTTCCTG TGATGAAACA
GCTGCGGCTG TCATTCAGGA TGGGAATATA CTATGTAATA TAGTTGCTTC ACAGCGAATT
CACGAGAAAT ATGGGGGAAT TGTACCGGAA TTAGCTTCAC GGGCACATCA ACAACATATC
ATTCCAGTGG TAGCGCAAGC ACTCCTTGAA GCAAATATAC AAAAATCAGA CCTGAATGCA
GTGGCTTGTA CCTCTGGCCC CGGATTATTA GGTGCATTAT TGGTGGGCGT TTCTTTTTCC
AAAGCATTTG CGTCGGCCTT ACACATTCCG GTGATCAAAG TGAATCACAT GAAAGCGCAT
ATTCTGGCAC ATTTTATTGG TGATGTAAAA CCGTCTTTTC CATTTATTTG TATGACTGTG
AGTGGCGGAC ATACGCAGCT GGTGATTGTG CGGAATTATT TAGAAATGGA AGTAGTAGGA
GAAACCCAGG ACGATGCCGT TGGGGAAGCA TTCGACAAAA CAGCTAAATT AATGGGTCTT
CCTTACCCAG GTGGACCATT GATTGATTCG TATGCAAAAC AAGGAAATCC GCTGGCATTT
CCGTTCCCAA CCGTTGATAT GCCCGGATAT AATTATTCTT TCAGCGGTAT AAAGACAGCT
TTTATGTATT TCCTGAAAAA AAATACAGCC GTTGATCCGG ATTTTATTCA GAAAAATTTA
CCTGATATTT GTGCCAGTGT ACAGCATGCG CTGATAGATG TACTGATGCG TAAGCTGAAG
CGTTTGGTTG TCGATACGGG TATCAACAGG GTAGCGATAG CGGGCGGTGT TTCGGCAAAT
TCCGGATTGC GGAAAGCCAT GGAACAAAAA CGCGAGCAGG AAGGTTGGGA TGTATACATA
CCCGCGTTTG AATATTGTAC CGATAATGCA GCCATGATTG CTGTAGCTGG ATATCACCAG
TATTTAGAAA ATGATTTTGC AGGATGGGAT CTGTCTCCGG AACCAAGATT GCGCATAGGA
GGAGGGTTAT AA
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| Protein sequence | MSDQSMSVTL LAIESSCDET AAAVIQDGNI LCNIVASQRI HEKYGGIVPE LASRAHQQHI
IPVVAQALLE ANIQKSDLNA VACTSGPGLL GALLVGVSFS KAFASALHIP VIKVNHMKAH
ILAHFIGDVK PSFPFICMTV SGGHTQLVIV RNYLEMEVVG ETQDDAVGEA FDKTAKLMGL
PYPGGPLIDS YAKQGNPLAF PFPTVDMPGY NYSFSGIKTA FMYFLKKNTA VDPDFIQKNL
PDICASVQHA LIDVLMRKLK RLVVDTGINR VAIAGGVSAN SGLRKAMEQK REQEGWDVYI
PAFEYCTDNA AMIAVAGYHQ YLENDFAGWD LSPEPRLRIG GGL
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