| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1955 |
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| Symbol | smpB |
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| ID | 4186444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2282174 |
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| End bp | 2282635 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071958 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_678563 |
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| Protein GI | 110638354 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.436569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0440292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACAA AAGAGATCGT TAAAAACGTC AATATAAAAA ATAAGAAGGC ATCTTTTGAA
TATGAATTCC TGGAAAAATA CGAAGCCGGA ATTGTATTGA AAGGTACGGA GATCAAGGCC
ATCCGCATGA GCAAAGCTTC TATCAGCGAA GCGTATTGCC TGTTTGATAA TGAAGAACTG
TGGATCAAGA ATATGAATAT TTCTTCGTAC GACAAAGGTT CTTTTTACAA CCATGATCCG
TTGAGTGCAC GTAAGCTACT GCTCCGTAAA GCAGAATTGA AAAAACTGTT CATGCATTCC
AAGGAAAAAG GCTTAACGAT CATTGCACTG CGCTTGTTTA CCAACGAACG CGGATATGCA
AAGATTGAGA TCGCACTGGC AAAAGGAAAG AAGCTGTATG ATAAACGCGA GTCGATCAAG
AGCAAAGATA ACGAGCGGGA GATGCAGCGC ATAAGGATTT AG
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| Protein sequence | MSTKEIVKNV NIKNKKASFE YEFLEKYEAG IVLKGTEIKA IRMSKASISE AYCLFDNEEL
WIKNMNISSY DKGSFYNHDP LSARKLLLRK AELKKLFMHS KEKGLTIIAL RLFTNERGYA
KIEIALAKGK KLYDKRESIK SKDNEREMQR IRI
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