Gene CHU_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1896 
SymbolfabH 
ID4186772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2215650 
End bp2216648 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content48% 
IMG OID638071894 
Product3-oxoacyl-[acyl-carrier-protein] synthase III 
Protein accessionYP_678504 
Protein GI110638295 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00765527 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACTAC ATTCACAACT TTTAGGAACG GGACATTACG TACCCGAACA GATCGTAACG 
AACAACGACC TTACTGCTTT CATGGAAACC TCCGATGCCT GGATCCAGGA ACGCACAGGA
ATTAAGGAAC GCCGCTTCTT TAAAGAAGGT GTTGATACGG TTTCCAACAT GGGCGCAAAA
GCTGCGCAGA TGGCGTTAGC AAACGCAAAG ATTGAAGCGA AAGAAATTGA CCTGATTGTG
TTCGCAACCT TAAGTCCGGA TTATGCATTC CCCGGTGCAG GTGTTTTATT GCAGTGCGAA
TTAGGTGTGC CGAACATTCC GGCGCTGGAT ATCCGTCAGC AGTGCGCCGG CTTTATCTAT
GCCCTCTCTG TGGCCGACCA GTTCATTAAA ACAGGCATGT ATAAAACGGT GCTGGTTGTA
GGAAGTGAAA TTCAATCCAA CATCATGGAA CTGTCTGATC GTGGCCGCAA TATGGCGGTG
ATCTTTGGTG ACGGTGCGGG CGCGGTTGTA TTAAAAGCAA CAACGGAAAA CAAGGGCGTC
CTTTCAACGC ATTTACATGC CGATGGTACG CATGCAGAAG AACTCATGCT GGAACACCCG
GGCAGCAGAA GCAAAACGCG TGTAACCACT GAAATGATTG AGAATGGAGC GCTGCTACCT
GTGATGAACG GACAAGGTGT ATTCAAACAG GCGGTTCAGA AATTCCCCGA AGTAATTAAA
GAAGCGTTGG ATGCAAATAA TTTACAAACA ACCGATATCA GTTTATTGAT CCCGCACCAG
GCCAATCTGC GCATCGCAGA GTATGTGCAG AAGCAATTGA AGCTGGAAGA CCATCAGGTA
TTCAATAACA TTCAGAAATA CGGCAATACG ACGGCAGCAT CTATCCCGAT TGCATTGAGC
GAAGCGGTAC AGGAAGGCAG ATTGAAATCC GGTGACCTGC TTTGTTTGGC AGCATTCGGG
AGCGGCTTTG TTTGGGCGAG TGCATTGGTG CGGTATTAA
 
Protein sequence
MQLHSQLLGT GHYVPEQIVT NNDLTAFMET SDAWIQERTG IKERRFFKEG VDTVSNMGAK 
AAQMALANAK IEAKEIDLIV FATLSPDYAF PGAGVLLQCE LGVPNIPALD IRQQCAGFIY
ALSVADQFIK TGMYKTVLVV GSEIQSNIME LSDRGRNMAV IFGDGAGAVV LKATTENKGV
LSTHLHADGT HAEELMLEHP GSRSKTRVTT EMIENGALLP VMNGQGVFKQ AVQKFPEVIK
EALDANNLQT TDISLLIPHQ ANLRIAEYVQ KQLKLEDHQV FNNIQKYGNT TAASIPIALS
EAVQEGRLKS GDLLCLAAFG SGFVWASALV RY