Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1896 |
Symbol | fabH |
ID | 4186772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2215650 |
End bp | 2216648 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638071894 |
Product | 3-oxoacyl-[acyl-carrier-protein] synthase III |
Protein accession | YP_678504 |
Protein GI | 110638295 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00765527 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACTAC ATTCACAACT TTTAGGAACG GGACATTACG TACCCGAACA GATCGTAACG AACAACGACC TTACTGCTTT CATGGAAACC TCCGATGCCT GGATCCAGGA ACGCACAGGA ATTAAGGAAC GCCGCTTCTT TAAAGAAGGT GTTGATACGG TTTCCAACAT GGGCGCAAAA GCTGCGCAGA TGGCGTTAGC AAACGCAAAG ATTGAAGCGA AAGAAATTGA CCTGATTGTG TTCGCAACCT TAAGTCCGGA TTATGCATTC CCCGGTGCAG GTGTTTTATT GCAGTGCGAA TTAGGTGTGC CGAACATTCC GGCGCTGGAT ATCCGTCAGC AGTGCGCCGG CTTTATCTAT GCCCTCTCTG TGGCCGACCA GTTCATTAAA ACAGGCATGT ATAAAACGGT GCTGGTTGTA GGAAGTGAAA TTCAATCCAA CATCATGGAA CTGTCTGATC GTGGCCGCAA TATGGCGGTG ATCTTTGGTG ACGGTGCGGG CGCGGTTGTA TTAAAAGCAA CAACGGAAAA CAAGGGCGTC CTTTCAACGC ATTTACATGC CGATGGTACG CATGCAGAAG AACTCATGCT GGAACACCCG GGCAGCAGAA GCAAAACGCG TGTAACCACT GAAATGATTG AGAATGGAGC GCTGCTACCT GTGATGAACG GACAAGGTGT ATTCAAACAG GCGGTTCAGA AATTCCCCGA AGTAATTAAA GAAGCGTTGG ATGCAAATAA TTTACAAACA ACCGATATCA GTTTATTGAT CCCGCACCAG GCCAATCTGC GCATCGCAGA GTATGTGCAG AAGCAATTGA AGCTGGAAGA CCATCAGGTA TTCAATAACA TTCAGAAATA CGGCAATACG ACGGCAGCAT CTATCCCGAT TGCATTGAGC GAAGCGGTAC AGGAAGGCAG ATTGAAATCC GGTGACCTGC TTTGTTTGGC AGCATTCGGG AGCGGCTTTG TTTGGGCGAG TGCATTGGTG CGGTATTAA
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Protein sequence | MQLHSQLLGT GHYVPEQIVT NNDLTAFMET SDAWIQERTG IKERRFFKEG VDTVSNMGAK AAQMALANAK IEAKEIDLIV FATLSPDYAF PGAGVLLQCE LGVPNIPALD IRQQCAGFIY ALSVADQFIK TGMYKTVLVV GSEIQSNIME LSDRGRNMAV IFGDGAGAVV LKATTENKGV LSTHLHADGT HAEELMLEHP GSRSKTRVTT EMIENGALLP VMNGQGVFKQ AVQKFPEVIK EALDANNLQT TDISLLIPHQ ANLRIAEYVQ KQLKLEDHQV FNNIQKYGNT TAASIPIALS EAVQEGRLKS GDLLCLAAFG SGFVWASALV RY
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