| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1891 |
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| Symbol | ycgM |
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| ID | 4186767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2210738 |
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| End bp | 2211349 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638071889 |
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| Product | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase |
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| Protein accession | YP_678499 |
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| Protein GI | 110638290 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00665763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAATTA TCGGCATAGG AAGAAATTAT AGCGAGCACG CAAAAGAGTT AAATAATCCG
CAACCGAAAG CTCCGATTAT TTTTTTAAAG CCCGACACAG CTTTATTAAA AAATAATGAA
AATTTCTATT TCCCATCTTT TTCAAAAGAT ATTCATCATG AAATTGAATT GGTTGTAAAA
ATATCAAAAG AAGGAAAAAA TATCCAGGAA AAATTTGCGC ATAGATATTA CGAAGAAATT
GGCTTAGGCA TAGATTTCAC GGCGCGTGAC CTGCAGCAGG AAGCAAAAGA ACAAGGTCTT
CCATGGACGT TAGCCAAAGG CTTTAACGGC TCTGCTCCCG TTTCAGAATT TGTTTCCAAA
TCAGAATTTT CCGATATTAA TAATATATCC TTTTCGTTAA CAATTAATGG AGAACTGCGT
CAGTCAGGAA CAACAGCAGA CATGGTGTTT TCCATTGATT TCCTTATTGC TTATATCTCG
CAATTTATCA CGTTGAAAAA AGGTGATCTT ATTTATACAG GTACACCCAA AGGGGTTGGT
TCTATTGTTA TTGGCGACAA ACTCGAAGGA TTTCTTGAAA ACAAACCCAT GCTTACCTGT
GAAATCTGTT AA
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| Protein sequence | MKIIGIGRNY SEHAKELNNP QPKAPIIFLK PDTALLKNNE NFYFPSFSKD IHHEIELVVK
ISKEGKNIQE KFAHRYYEEI GLGIDFTARD LQQEAKEQGL PWTLAKGFNG SAPVSEFVSK
SEFSDINNIS FSLTINGELR QSGTTADMVF SIDFLIAYIS QFITLKKGDL IYTGTPKGVG
SIVIGDKLEG FLENKPMLTC EIC
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