Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1876 |
Symbol | nhaA |
ID | 4184460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2195172 |
End bp | 2196335 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638071874 |
Product | Na+/H+ antiporter |
Protein accession | YP_678484 |
Protein GI | 110638275 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00181634 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGTTA CTCAAATGTA TAAGAACTTC CTCGAAAATG AAAAAGCAGG AGGAGTTGTA CTGATCATTG CAACCATCGT ATCATTACTT GTAGCAAATT CTTCGATAGG CCACAGTTAT ATTGGTTTCT GGGAGATGTT CGTTGGCGGA CATACCATAG AACATTATGT GAACGATGGT TTAATGACGA TCTTCTTCTT ACTTATTGGC CTGGAATTAG AACGGGAAGT GTACGCAGGT GAACTATCCA ATTTTAAAAA AGCATTACTT CCGATTATCG CTGCATTAGG AGGAATGATT GTACCTGCCT GTATTCACAT GTTTTTTAAT ACAGGCACAC CGTTTCAATC GGGTTCAGGA ATTCCGATGG CAACGGACAT CGCATTTGCC GTAGGCATTC TTTCCTTACT GGGTAACAAG GTGCCGCTTT CATTAAAGGT ATTTCTTACG GCGCTGGCAG TTATTGATGA CCTGGGTGCA ATATTTACAA TTGCTATTTT TTACTCTAGA GGTATTGACG TTATGTATTT AGCCGGCGCT GCAGGTATTT GGGCCGTTCT ATTTATTTTA AACCGCCGTA ATGTAAATAT TCTATGGCCT TATTTACTGG GCGGCATAGT CATGTGGTAT TTCATGTTGC ACTCAGGCGT ACATGCAACA ATCACAGGTG TGATCTTAGC CTTTGTAATT CCGTTTGGTA AAGGCGATCC GGATTCCATC TCTATAAAGC TGCAGCATTG GTTACATAAA CCGGTGGCAT TTATTATTCT GCCCATCTTT GCTTTAGCCA ATACATGTAT TATTATTGAC AGTGATTGGT CAGCATCGCT GATGAGTACA AACAGCATCG GTATTTTCCT GGGTCTTGTT GTTGGTAAGC CGCTTGGTAT TACACTGTTC TGTGCTATAG CTGTGTGGCT GGGAATCTGT TCCATTCCGA ATGATCTTAA ATGGATGCAG GTTATAGGTG TTGCATGTCT GGGCGGCATA GGTTTTACCA TGTCCATCTT TATAACCCTG CTGGCGTTTG ATGATCATGC GGTTATTTCC GGTTCAAAGA TTGCCATTAT GCTGTCATCG GTAACAGCAG CCCTTATCGG ACTACTGTGG CTAAAAATGA CCCTTAAAGA ACCTCTTTCC AACGAATTGA CAGAAGAGAT CTAA
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Protein sequence | MKVTQMYKNF LENEKAGGVV LIIATIVSLL VANSSIGHSY IGFWEMFVGG HTIEHYVNDG LMTIFFLLIG LELEREVYAG ELSNFKKALL PIIAALGGMI VPACIHMFFN TGTPFQSGSG IPMATDIAFA VGILSLLGNK VPLSLKVFLT ALAVIDDLGA IFTIAIFYSR GIDVMYLAGA AGIWAVLFIL NRRNVNILWP YLLGGIVMWY FMLHSGVHAT ITGVILAFVI PFGKGDPDSI SIKLQHWLHK PVAFIILPIF ALANTCIIID SDWSASLMST NSIGIFLGLV VGKPLGITLF CAIAVWLGIC SIPNDLKWMQ VIGVACLGGI GFTMSIFITL LAFDDHAVIS GSKIAIMLSS VTAALIGLLW LKMTLKEPLS NELTEEI
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