Gene CHU_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1876 
SymbolnhaA 
ID4184460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2195172 
End bp2196335 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content42% 
IMG OID638071874 
ProductNa+/H+ antiporter 
Protein accessionYP_678484 
Protein GI110638275 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00181634 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTTA CTCAAATGTA TAAGAACTTC CTCGAAAATG AAAAAGCAGG AGGAGTTGTA 
CTGATCATTG CAACCATCGT ATCATTACTT GTAGCAAATT CTTCGATAGG CCACAGTTAT
ATTGGTTTCT GGGAGATGTT CGTTGGCGGA CATACCATAG AACATTATGT GAACGATGGT
TTAATGACGA TCTTCTTCTT ACTTATTGGC CTGGAATTAG AACGGGAAGT GTACGCAGGT
GAACTATCCA ATTTTAAAAA AGCATTACTT CCGATTATCG CTGCATTAGG AGGAATGATT
GTACCTGCCT GTATTCACAT GTTTTTTAAT ACAGGCACAC CGTTTCAATC GGGTTCAGGA
ATTCCGATGG CAACGGACAT CGCATTTGCC GTAGGCATTC TTTCCTTACT GGGTAACAAG
GTGCCGCTTT CATTAAAGGT ATTTCTTACG GCGCTGGCAG TTATTGATGA CCTGGGTGCA
ATATTTACAA TTGCTATTTT TTACTCTAGA GGTATTGACG TTATGTATTT AGCCGGCGCT
GCAGGTATTT GGGCCGTTCT ATTTATTTTA AACCGCCGTA ATGTAAATAT TCTATGGCCT
TATTTACTGG GCGGCATAGT CATGTGGTAT TTCATGTTGC ACTCAGGCGT ACATGCAACA
ATCACAGGTG TGATCTTAGC CTTTGTAATT CCGTTTGGTA AAGGCGATCC GGATTCCATC
TCTATAAAGC TGCAGCATTG GTTACATAAA CCGGTGGCAT TTATTATTCT GCCCATCTTT
GCTTTAGCCA ATACATGTAT TATTATTGAC AGTGATTGGT CAGCATCGCT GATGAGTACA
AACAGCATCG GTATTTTCCT GGGTCTTGTT GTTGGTAAGC CGCTTGGTAT TACACTGTTC
TGTGCTATAG CTGTGTGGCT GGGAATCTGT TCCATTCCGA ATGATCTTAA ATGGATGCAG
GTTATAGGTG TTGCATGTCT GGGCGGCATA GGTTTTACCA TGTCCATCTT TATAACCCTG
CTGGCGTTTG ATGATCATGC GGTTATTTCC GGTTCAAAGA TTGCCATTAT GCTGTCATCG
GTAACAGCAG CCCTTATCGG ACTACTGTGG CTAAAAATGA CCCTTAAAGA ACCTCTTTCC
AACGAATTGA CAGAAGAGAT CTAA
 
Protein sequence
MKVTQMYKNF LENEKAGGVV LIIATIVSLL VANSSIGHSY IGFWEMFVGG HTIEHYVNDG 
LMTIFFLLIG LELEREVYAG ELSNFKKALL PIIAALGGMI VPACIHMFFN TGTPFQSGSG
IPMATDIAFA VGILSLLGNK VPLSLKVFLT ALAVIDDLGA IFTIAIFYSR GIDVMYLAGA
AGIWAVLFIL NRRNVNILWP YLLGGIVMWY FMLHSGVHAT ITGVILAFVI PFGKGDPDSI
SIKLQHWLHK PVAFIILPIF ALANTCIIID SDWSASLMST NSIGIFLGLV VGKPLGITLF
CAIAVWLGIC SIPNDLKWMQ VIGVACLGGI GFTMSIFITL LAFDDHAVIS GSKIAIMLSS
VTAALIGLLW LKMTLKEPLS NELTEEI