| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1811 |
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| Symbol | mhpC |
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| ID | 4185037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2126087 |
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| End bp | 2126878 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071810 |
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| Product | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase |
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| Protein accession | YP_678420 |
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| Protein GI | 110638211 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00537081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATATTCA AGAACAATAA ATCAGAAAAA CGTCAGATTT TTAACTTCCA TGAAAAAGGA
GAAGGCGAAA CAATTATTTT CCTGCACGGA TTGTTTGGTG AGCTTAGCAA CTGGAAAGCA
ACGATCGATC ATTTCAGTAA GAGCTATCGC GTTGTTGTAC CTATTATGCC GATCTATGAT
GGCACCATGC AAAAAGATGG TCTGGATGGT TTGGTAACGT ATCTTCATGA ATTGGTTACA
GAATTAAAAA TAGAGCGTTT CAATCTGGTT GGAAATTCTT TAGGCGGACA GGTAGCAATT
TTGTATTCTG TTGCGTATCC TGAAAAGGTG ATCCGTTTGG TGTTAACGGG CAGCGCTGGT
TTATATGAAA GCACTATGGG GGCAAGTTAT CCGAAACGTG GTGACTATGC TTATATCGAA
GACCGTGTAC GTTATACATT CCACAACGAC AATATTGTTA CTAAAAATCT GGTTGATCAG
GTCTTTGAAA CAGTAAACGA TATACGCAAA TCGATTCGTG TTATTAAAAT CGTGCGTGCT
GCAAACGGGA ATAATGTTGC AGATGCGTTA AAACAGATAA CTACTCCAAC GTTACTTGTA
TGGGGCAGAC AGGACAGGAT TACACCGCTT GAGATTGCTT ATAAATTTAA AAAATTACTT
TCCGGAAACA CCGAGCTTCG TATCATTGAA GAATGCGGGC ACGCACCTAT GATGGAGCGT
CCGGAGCAGT TTAACGAAGC ATTGGAAAGT TATTTTAACA CCGAAACATT TGCATACGCA
AACGTAGGTT AA
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| Protein sequence | MIFKNNKSEK RQIFNFHEKG EGETIIFLHG LFGELSNWKA TIDHFSKSYR VVVPIMPIYD
GTMQKDGLDG LVTYLHELVT ELKIERFNLV GNSLGGQVAI LYSVAYPEKV IRLVLTGSAG
LYESTMGASY PKRGDYAYIE DRVRYTFHND NIVTKNLVDQ VFETVNDIRK SIRVIKIVRA
ANGNNVADAL KQITTPTLLV WGRQDRITPL EIAYKFKKLL SGNTELRIIE ECGHAPMMER
PEQFNEALES YFNTETFAYA NVG
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