Gene CHU_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1792 
Symbol 
ID4184688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2100883 
End bp2101857 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content37% 
IMG OID638071791 
Productb-glycosyltransferase 
Protein accessionYP_678401 
Protein GI110638192 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.794906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATT TCCCCAAAGA TATATCTGTT GTTATCCCGT TGTTTAACGA AGAAGAGTCG 
TTGCCTGAAC TGGAATTATG GCTGAGAGAA GTTATGCTGA AAAATAATTT CAGATACGAA
CTGATTTTTG TAGATGATGG CAGCACAGAT AATTCCTGGG ATGTATTGAT GAACCTGGCC
GCACAGAATT CAAACATTCA TGCGATCCGT TTTAACCGAA ACTATGGTAA ATCTGCCGGG
TTGAATGTTG GCTTTAAAGC AGCTAAAGGC GAAGTGGTTA TTACCATGGA TGCAGATTTA
CAGGACAGTC CGGATGAGAT TCCTGCTCTA TATAAAATGA TTATTGAAGA GAAATATCAT
TTGGTATCCG GCTGGAAAAA GAAACGGTTC GACCCGATTT CAAAGACAAT TCCTACAAAA
TTATACAATG CTGCAGCACG TGCCATGTCT GGTATTAAGC TAAATGATTT TAACTGCGGA
CTGAAAGCAT ACCATAACCG TGTCATTAAA TCGATTGATG TATATGGTGA GATGCATCGC
TATATACCTG TAATTGCTAA ATGGAACGGT TATAATAAAA TTGGTGAAAA AGTTGTAGAA
CACAGAGCAC GTAAATACGG TGTTACTAAG TTTGGTTTGG AGCGTTTCAT TTATGGTCCC
CTTGATCTGT TGTCCATTTC TTTTGTAAGT AAATACAAAA AAAGACCGAT GCATTTCTTT
GGCAGCATGG GTATTTTATC ATTCCTTGTA GGCTTAGGTA GTACCATCTA TTTGATTTCA
GATAAACTGT ATCATATTTA CATATCAAAA AGCGGTATAC ACAGAGATGT TGTGAACAAC
ACATGGTTCT ATCTGGCATT AGTTGCAATC ATTATCGGGG TACAATTATT TTTATCCGGT
TTTATCGGGG AAATGATGAT TCAGCAATCC GATAAAAAGA ATGATTATCT GGTATCCGAA
GAAATTGGTG CATGA
 
Protein sequence
MSNFPKDISV VIPLFNEEES LPELELWLRE VMLKNNFRYE LIFVDDGSTD NSWDVLMNLA 
AQNSNIHAIR FNRNYGKSAG LNVGFKAAKG EVVITMDADL QDSPDEIPAL YKMIIEEKYH
LVSGWKKKRF DPISKTIPTK LYNAAARAMS GIKLNDFNCG LKAYHNRVIK SIDVYGEMHR
YIPVIAKWNG YNKIGEKVVE HRARKYGVTK FGLERFIYGP LDLLSISFVS KYKKRPMHFF
GSMGILSFLV GLGSTIYLIS DKLYHIYISK SGIHRDVVNN TWFYLALVAI IIGVQLFLSG
FIGEMMIQQS DKKNDYLVSE EIGA