Gene CHU_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1791 
Symbol 
ID4184687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2099852 
End bp2100886 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content42% 
IMG OID638071790 
Productb-glycosyltransferase 
Protein accessionYP_678400 
Protein GI110638191 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.780002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTT ATTCCATCAT AATACCGGTT TACAACAGAC CGGAAGAAAT AAAGGAATTA 
CTGGAGAGCC TGACTCTTCA GACCTACAGG AATTTTGAAG TAGTTATTGT TGAAGATGGT
TCAGCACAGT CTGCTGAACT CATTGTGAAA TCTTTTCAGG ACAGGCTTAC CATTCAATAT
TTTTATAAAG AAAATACCGG GCAGGGTTTA TCCCGCAATT ACGCGTATGC ACGCGCGAAA
GGCGATTACT TTATTGTTTT TGATAGTGAT TGTTTAATTC CGCCGCAATA TCTTCAGGCG
GTTGAAAATC GTTTGAATAC AAATTACCTG GATGCGTTTG GCGGTCCGGA TCGTGCCGAC
GTTTCTTTTA CTCCGGTTCA AAAAGCCATT AGTTATTCCA TGACTTCGCT GTTCACAACA
GGCGGTATTC GTGGGAATAA AAAAGGCGTT GGGGTGTTTC ACCCGCGCAG CTTTAACATG
GGCATTTCCA GAGAAGTCTG GGAGCGTACG CAAGGTTATA TCATTACCCG CATGGGCGAA
GATATAGAAT TCAGTATCCG CATCATGAGT TATGGCTTCA CCGTCGGCTT GATCGAAGAA
GCATATGTAT TCCATAAACG CCGCACAAAT TTCAAGCAAT TCTTTAAACA GGTTCATTTT
TTTGGCAGAG CCCGTATCAA TATATTCCGC TTTGTTCCTT CGGAATTAAA ACTGACACAT
TTCTTTCCCA TGTGTTTTGT GTTGTTCTCT TCCATATCTG TATTGCTGGG AATTCTGAAT
GTACCTATCG GAGCGCTGTT GTGCTTCTTG TTGTATTGCT ATACCGGCGC AATCTTTATT
GATGCTTCCT TAAAAAACAG CAGTATTAAA ATCGGGCTGT TAAGCGTAGC TGCGGCATAT
ACACAGTTAT GGGGGTATGG CATTGGTTTT ATGAAAGAGG GGATCACAGA ACTTTTTTCT
CCAACCCGCA AAAAGCTCAA AGAACTGCTG ATCCGGAAAA AAGAAGATGC TGCTGCGCAC
AACGCGATGC ATTGA
 
Protein sequence
MRFYSIIIPV YNRPEEIKEL LESLTLQTYR NFEVVIVEDG SAQSAELIVK SFQDRLTIQY 
FYKENTGQGL SRNYAYARAK GDYFIVFDSD CLIPPQYLQA VENRLNTNYL DAFGGPDRAD
VSFTPVQKAI SYSMTSLFTT GGIRGNKKGV GVFHPRSFNM GISREVWERT QGYIITRMGE
DIEFSIRIMS YGFTVGLIEE AYVFHKRRTN FKQFFKQVHF FGRARINIFR FVPSELKLTH
FFPMCFVLFS SISVLLGILN VPIGALLCFL LYCYTGAIFI DASLKNSSIK IGLLSVAAAY
TQLWGYGIGF MKEGITELFS PTRKKLKELL IRKKEDAAAH NAMH