Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1731 |
Symbol | yobV |
ID | 4183912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2034677 |
End bp | 2035369 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638071730 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_678340 |
Protein GI | 110638131 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.590959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.873384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATA ACGACACAAA ACGTCTTTCC CGGCTCACGG CAATCATAAC CCAATTGCAA ACCAAACGGC TGCTGACAGC CACTGAGTTG GCAAACAGGT TTTCTGTCAG TGTCCGGACC ATTTACAGAG ATATCAGAGC ACTGGAACAA TCAGGCGTTC CCATCCTTAC CGAAGAAGGC AAAGGATATA CATTAATGGA AGGTTACCGG ATACCTCCTG TAATGTTTAC CGAAAGCCAG GCCAATGCAT TGATCCTGGC AGAGCAGCTT GTACTGAAAA ATAAAGACGC TTCTTTCGTT CAGCATTATT CAGAAGCTAT TGATAAAATT AAAGCTGTAC TGGGCCACCC GATCAAAGAT AAGGTAAACC TGCTTGCTGA ACGGACGCGT TTTGATCAAA ATACAAATCG GGAACGGAAC AGTAAAGATT TGTCTGATTT ACAATTTGCA CTGACTAATT TTTACCTGAC CCGGATTGAG TATATTAACG AAGCAGAGGC ACAAACCGAT CGGCTTATTG AACCCTTTGC TTTGTTAAGT ACGCAGGAAA ACTGGTTGTT AGTAGCGTGG TGCCGCCTGC GTAACGAGTT TCGCTATTTT CGCCTGGATC GAATTAAAAA GCTTGAAATC CAAACCGAAA AATTCAATCC GCATAACCTG ACCTTACAGG AGTTTTTCGA TAAATACCAT TAA
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Protein sequence | MIDNDTKRLS RLTAIITQLQ TKRLLTATEL ANRFSVSVRT IYRDIRALEQ SGVPILTEEG KGYTLMEGYR IPPVMFTESQ ANALILAEQL VLKNKDASFV QHYSEAIDKI KAVLGHPIKD KVNLLAERTR FDQNTNRERN SKDLSDLQFA LTNFYLTRIE YINEAEAQTD RLIEPFALLS TQENWLLVAW CRLRNEFRYF RLDRIKKLEI QTEKFNPHNL TLQEFFDKYH
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