Gene CHU_1731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1731 
SymbolyobV 
ID4183912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2034677 
End bp2035369 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content43% 
IMG OID638071730 
ProductDeoR family transcriptional regulator 
Protein accessionYP_678340 
Protein GI110638131 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.590959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.873384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATA ACGACACAAA ACGTCTTTCC CGGCTCACGG CAATCATAAC CCAATTGCAA 
ACCAAACGGC TGCTGACAGC CACTGAGTTG GCAAACAGGT TTTCTGTCAG TGTCCGGACC
ATTTACAGAG ATATCAGAGC ACTGGAACAA TCAGGCGTTC CCATCCTTAC CGAAGAAGGC
AAAGGATATA CATTAATGGA AGGTTACCGG ATACCTCCTG TAATGTTTAC CGAAAGCCAG
GCCAATGCAT TGATCCTGGC AGAGCAGCTT GTACTGAAAA ATAAAGACGC TTCTTTCGTT
CAGCATTATT CAGAAGCTAT TGATAAAATT AAAGCTGTAC TGGGCCACCC GATCAAAGAT
AAGGTAAACC TGCTTGCTGA ACGGACGCGT TTTGATCAAA ATACAAATCG GGAACGGAAC
AGTAAAGATT TGTCTGATTT ACAATTTGCA CTGACTAATT TTTACCTGAC CCGGATTGAG
TATATTAACG AAGCAGAGGC ACAAACCGAT CGGCTTATTG AACCCTTTGC TTTGTTAAGT
ACGCAGGAAA ACTGGTTGTT AGTAGCGTGG TGCCGCCTGC GTAACGAGTT TCGCTATTTT
CGCCTGGATC GAATTAAAAA GCTTGAAATC CAAACCGAAA AATTCAATCC GCATAACCTG
ACCTTACAGG AGTTTTTCGA TAAATACCAT TAA
 
Protein sequence
MIDNDTKRLS RLTAIITQLQ TKRLLTATEL ANRFSVSVRT IYRDIRALEQ SGVPILTEEG 
KGYTLMEGYR IPPVMFTESQ ANALILAEQL VLKNKDASFV QHYSEAIDKI KAVLGHPIKD
KVNLLAERTR FDQNTNRERN SKDLSDLQFA LTNFYLTRIE YINEAEAQTD RLIEPFALLS
TQENWLLVAW CRLRNEFRYF RLDRIKKLEI QTEKFNPHNL TLQEFFDKYH