| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1659 |
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| Symbol | romA |
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| ID | 4183376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1944452 |
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| End bp | 1945582 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638071653 |
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| Product | outer membrane protein |
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| Protein accession | YP_678269 |
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| Protein GI | 110638060 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.276517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTAA AACGAATAAA AAAACGCATG TTTATCACAT TCAGCATTAT TGCCGTACTG
GCAATCGCAT TATATATATT TCTGCAAACA GCACCTTTCG GAAATCCGCC GGCAGACGCC
CGTCTGGAAC GCATCAGAAA ATCAGCCAAC TATAAAGACG GTGTATTTAA AAATCTTTCC
AATACGCCGG TAATGGCCGA GGATGCATCT TACATGGATA TGATCAAACA GCAATTCTCT
AAAGATTCAA CACGTGAACC TGCGGTATGC ATTCCAAGTG TGAAGCGCGA TCTATCTCTT
GTCCCTTCTG ATCGGCCGGT GATTACCTGG TTCGGACATT CGACGTATTT AATTCAAACA
GAAGGGAAAA ATATTTTAAT TGATCCTGTT TTTTGTACCA GCACTTCTCC GGTTCAGTTT
GTAGGTAATA AAAAATACAA GGGAACCGAA GTGTATACAC CGGCTGATTT TCCGGCAATC
AATTATCTGA TCCTGACACA CGATCATTAC GATCACCTGG ATTACCAGAC AACGCTTGAT
ATGCAATCAA AGGTTTTTTC GTATTACATG CCGCTGGGTG TTGGTTCGCA CTTAGAATCC
TGGGGTATTG ATACGGCTAA ATTACACGAA CTGGATTGGT GGCAGGAAAT TGATCTGGAA
CCGGGTTATA AGCTTGTATG CCTGCCGGCG CGCCATTTCT CCGGTCGCAG TATTACAGAC
AGAGGTAAAA CGTTGTGGGC ATCTTATCTG TTGATTACAC CAACACATAA AATTTATATT
GGCGGAGACT CCGGCTATGA TACACACTTT AAACAGATTG CGGATAAATA CGGCGCTGTT
GATATTGCGT TTTTAGAATC CGGGCAATAC AATGCTTACT GGCCATACAT TCACATGATG
CCTGAGCAGA CGGTGCAGGC AGCAAAAGAT CTGCAGGCGA AAGTATTGTT GCCGGTACAC
TGGGGAAAAT ATACGTTGGC GCTGCACCCC TGGGATGAAC CTATCAAACG GTTAACACTG
GAGGCGCATA AACAGCAGGT AAACGTTGCT ACCCCAATGA TTGGTGAACC GGTGATACTG
GATAGTATTT TGCCGCACAG TACGTGGTGG GTGCCTGAAG GGAAAAAGTA A
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| Protein sequence | MNVKRIKKRM FITFSIIAVL AIALYIFLQT APFGNPPADA RLERIRKSAN YKDGVFKNLS
NTPVMAEDAS YMDMIKQQFS KDSTREPAVC IPSVKRDLSL VPSDRPVITW FGHSTYLIQT
EGKNILIDPV FCTSTSPVQF VGNKKYKGTE VYTPADFPAI NYLILTHDHY DHLDYQTTLD
MQSKVFSYYM PLGVGSHLES WGIDTAKLHE LDWWQEIDLE PGYKLVCLPA RHFSGRSITD
RGKTLWASYL LITPTHKIYI GGDSGYDTHF KQIADKYGAV DIAFLESGQY NAYWPYIHMM
PEQTVQAAKD LQAKVLLPVH WGKYTLALHP WDEPIKRLTL EAHKQQVNVA TPMIGEPVIL
DSILPHSTWW VPEGKK
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