Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1656 |
Symbol | gluP |
ID | 4183373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1940760 |
End bp | 1942136 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638071650 |
Product | glucose/galactose transporter |
Protein accession | YP_678266 |
Protein GI | 110638057 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGTG GTAATGCTCC AGTAAATTAT TCATCCAGTT CTCCGCTCGA TCCAAATACA AAGTATACGT CTGCCATTGC GTTAATGGCA ACACTATTCT TTATCATTGG TTTTATAACC GTACTGAATG ATGTACTTAT TCCAATTATG AAAAACGTCT TTGTATTTAA AGACAATGAA AATTGGAAAT TACTGTTAAT TCAATTCAGT TTCTTTATGG CATATGGCTT ATTATCTATT CCGGGAGGAA ATCTGATAAA ACGTATTGGT TATAAAAAAG GAACAATCTG TTCATTATTC ATTGTTGCAT TTGGTTTATT ATTATTCTAT CCGGCTTCAG AATATGCTTC ATACGGTTTG TTCTTATTAG CTTTATTTAT TGTGGGAAGT GGATTCGCCA TTCTTCAGGT TGCAATCAAT CCCTACCTGA TTGCGTTAGG TTCTCCGGAA ACAGGAGCCG CGCGACTAAA TTTGGGTGGT GCACTAAACT CAACGGCAAC AGCTATCGGC CCAATTTTCG GTTCATTCTA TTTACTTAAT GAATGTTTAA TGTCTGAAAC CGAAACGCTT TCTACAACAC GAACATTATA TGTTGCCATT GCTCTATTGA TTATTACCAT TGCAACATTG ATGATCTTTA TGAAGCTTCC GAAACTTTCT ATTGAAAATG ATAAAGATGA AGTACTTTCA GGAAGCATTT TTGAATTCAG TCATTTGATA TTTGGTGCAG GCGCAATCTT CTTTTACGTA GGTGCGGAAG TTGTAATCGG GAGCTTATTG GTGGTGTACT TAAAGTCAGA CATCATGGGT AATATTCCTG AAAAATTTGC AGCCAGCTTA GTTGCCTATT ACTGGGCAGG TGCTATGATC GGCCGATTTA TGGGAAGCAA AATCACGCAA AAAATATCAC CCAATAAAGC ATTATCCTTT GTAGCTGTTG TTGCATTTGC ACTGATTTTT TTAAGTATGA CAGATTTTAT GATTTCGAAT TCTGTAACCG TTCCGGTAAT AAATATGGGA GAAGATTGCA GCACATTGGA ATTTTATTTC AACTTTAAAT CATTAACCGT TCCGCTGGCA GCAATCTGTT TAATATTAAT AGGTTTATTT AACGCGATTA TGTGGCCAAG CATCTTCTCC TTGGGTATTG CGCGATTAGG TAAATATACA AGTAAAGGGT CTGGCTTAAT GGTAACCATG GTAGCTGGCG GTGCATTGGT ATCGTTGTTG CAAGGTATCT TAGCAGATCA GGTTGGTTAC AGATACAGCT TTACCTTATG CCTGGTATGT TATGCTTATA TCATCTTCTT TGCAATGAAA GGATATAAAC CACATAAGGT TGCAGATAAC GAGACGGGAG AAATTCTGTC TGCTTAA
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Protein sequence | MAGGNAPVNY SSSSPLDPNT KYTSAIALMA TLFFIIGFIT VLNDVLIPIM KNVFVFKDNE NWKLLLIQFS FFMAYGLLSI PGGNLIKRIG YKKGTICSLF IVAFGLLLFY PASEYASYGL FLLALFIVGS GFAILQVAIN PYLIALGSPE TGAARLNLGG ALNSTATAIG PIFGSFYLLN ECLMSETETL STTRTLYVAI ALLIITIATL MIFMKLPKLS IENDKDEVLS GSIFEFSHLI FGAGAIFFYV GAEVVIGSLL VVYLKSDIMG NIPEKFAASL VAYYWAGAMI GRFMGSKITQ KISPNKALSF VAVVAFALIF LSMTDFMISN SVTVPVINMG EDCSTLEFYF NFKSLTVPLA AICLILIGLF NAIMWPSIFS LGIARLGKYT SKGSGLMVTM VAGGALVSLL QGILADQVGY RYSFTLCLVC YAYIIFFAMK GYKPHKVADN ETGEILSA
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