Gene CHU_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1643 
SymbolthrS 
ID4183361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1925857 
End bp1927794 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content41% 
IMG OID638071636 
Productthreonyl-tRNA synthetase 
Protein accessionYP_678253 
Protein GI110638045 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.193799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0776011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAGA TTACTTTACC CGACGGATCA ATCCGCGAAT ACGAAAAAGG AATCACGAGC 
ATGGGCATTG CCCTTAGCAT TAGTGAAGGA CTTGCTAGAA ACGTTCTGGC TGCCAAAGTA
AATGGAGAAA TATGGGATGC TTCAAGAGCA ATCACGAGCG ACTCTACGGT GCAGTTATTG
ACGTGGAACG ACACGGAAGG TAAATCTACA TTTTGGCACT CTTCTGCACA CTTACTGGCA
GAAGCGCTTG AAGCATTATA CCCAGGCACA AAATTCGGAA TCGGGCCGGC TATTGAAACC
GGTTTCTACT ACGATGTAGA CTTTGGTGAC CGCGCATTTT CTCAGGATGA TTTTGAAAAT
ATTGAAAAGA AAGTGCTTGA ATTAGCCAAG CAAAAAAATG CGTATATCCG TAAAGAGATT
TCAAAAAAAG ACGCTGTTGC TTATTTTACA GATAAACAGG ATCCGTACAA ACTGGATTTG
TTAGAAGGTC TTTCAGATGG CTCTATTACT TTCTACAAGC AAGGTGCCTT TACAGATCTT
TGCAGAGGGC CGCACATTCC GGATACAGGA TTCATCAAGG CTGTAAAGCT GATGAGTGTT
GCCGGTGCGT ACTGGAGAGG TGATGAAAAA AGCAAACAGT TAACACGTAT TTACGGTGTT
ACGTTTCCTA AGCAGCAGGA GTTGAAAGAC TACTTAACTA TTCTGGAAGA GGCGAAGAAA
CGTGATCATA GAAAATTAGG TAAAGAATTA GAATTGTTTG CGTTCTCTGA AAAAGTAGGA
ATGGGCTTGC CGTTATGGTT ACCGAAAGGT GCTTTACTGC GCGAACGCCT TGAAAACTTT
TTAAAGAAAG CTCAGGTACG TGCAGGTTAT CAGCCTGTAG TAACGCCACA TATCGGAAAC
AAACAATTGT ATGTTACTTC AGGGCACTTT GATAAATATG GTAAAGATTC GTTCCAGCCA
ATATTTACGC CGCATGAAGG TGAGCAGTTT CTGTTAAAAC CAATGAACTG TCCGCACCAC
TGCGAGATAT ACAAAACAAA ACCGCGCTCC TATAAAGATC TTCCAATCCG TTTTGCAGAA
TTTGGTACGG TATACCGATA TGAGCAAAGC GGAGAGCTTC ATGGGTTAAC CCGTGTAAGA
GGCTTTACTC AGGATGATGC ACATATCTTT TGCAGACCGG ATCAGGTAAA AGAAGAGTTC
TTAAAAGTTA TTGATCTGGT GCTTTATGTA TTTAAAGTAT TAGGCTTTAA CGATTACACT
GCACAGATTT CGTTACGCGA TCCTGAGAAT AAAGACAAAT ATATCGGTGA AGATGAGCAG
TGGCAAAAGG CTGAACAAGC CATCATTGAA GCATCCGCTG AGAAGGGTTT AAGTACAGTA
ACTGAATTGG GAGAGGCTGC ATTCTATGGG CCGAAACTCG ATTTCATGGT AAAAGATGCA
TTAGGAAGAA AATGGCAGCT GGGTACCATT CAGGTAGATT ATCAATTGCC AAATCGTTTT
GAGCTTGAGT ACACAGGCTC TGACAACCAA AAACACCGTC CGGTAATGTT ACACCGCGCA
CCATTCGGTT CATTAGAGCG ATTTATTGCC GTATTGATTG AGCACGTTGC CGGCAACTTC
CCGCTATGGC TTTCTCCGGA TCAGATTGCA ATTTTACCAA TTTCCGAAAA ATTTAACGAT
TATGCCCAGG ATGTATATGA CAGGCTTTTG GTTAAAGACA TTCGCGGGTT TATAGACAAC
CGCGATGAAA AAATCGGTAA GAAGATTAGA GATACGGAAG TAAAAAAAGT GCCTTTTATG
CTTGTAATAG GGGAAAAAGA AGTGAACGAA GGAAAAATTG CCATTCGTAA ACACGGTGGG
GAAGATCTTG GAAGCATGTT GGTAGAAGAT TTTATTCAAT ATTTTGAATC AGAAATTGCA
AAACAATTAG CAGTCTGA
 
Protein sequence
MIKITLPDGS IREYEKGITS MGIALSISEG LARNVLAAKV NGEIWDASRA ITSDSTVQLL 
TWNDTEGKST FWHSSAHLLA EALEALYPGT KFGIGPAIET GFYYDVDFGD RAFSQDDFEN
IEKKVLELAK QKNAYIRKEI SKKDAVAYFT DKQDPYKLDL LEGLSDGSIT FYKQGAFTDL
CRGPHIPDTG FIKAVKLMSV AGAYWRGDEK SKQLTRIYGV TFPKQQELKD YLTILEEAKK
RDHRKLGKEL ELFAFSEKVG MGLPLWLPKG ALLRERLENF LKKAQVRAGY QPVVTPHIGN
KQLYVTSGHF DKYGKDSFQP IFTPHEGEQF LLKPMNCPHH CEIYKTKPRS YKDLPIRFAE
FGTVYRYEQS GELHGLTRVR GFTQDDAHIF CRPDQVKEEF LKVIDLVLYV FKVLGFNDYT
AQISLRDPEN KDKYIGEDEQ WQKAEQAIIE ASAEKGLSTV TELGEAAFYG PKLDFMVKDA
LGRKWQLGTI QVDYQLPNRF ELEYTGSDNQ KHRPVMLHRA PFGSLERFIA VLIEHVAGNF
PLWLSPDQIA ILPISEKFND YAQDVYDRLL VKDIRGFIDN RDEKIGKKIR DTEVKKVPFM
LVIGEKEVNE GKIAIRKHGG EDLGSMLVED FIQYFESEIA KQLAV