Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1643 |
Symbol | thrS |
ID | 4183361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1925857 |
End bp | 1927794 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071636 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_678253 |
Protein GI | 110638045 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.193799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0776011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAGA TTACTTTACC CGACGGATCA ATCCGCGAAT ACGAAAAAGG AATCACGAGC ATGGGCATTG CCCTTAGCAT TAGTGAAGGA CTTGCTAGAA ACGTTCTGGC TGCCAAAGTA AATGGAGAAA TATGGGATGC TTCAAGAGCA ATCACGAGCG ACTCTACGGT GCAGTTATTG ACGTGGAACG ACACGGAAGG TAAATCTACA TTTTGGCACT CTTCTGCACA CTTACTGGCA GAAGCGCTTG AAGCATTATA CCCAGGCACA AAATTCGGAA TCGGGCCGGC TATTGAAACC GGTTTCTACT ACGATGTAGA CTTTGGTGAC CGCGCATTTT CTCAGGATGA TTTTGAAAAT ATTGAAAAGA AAGTGCTTGA ATTAGCCAAG CAAAAAAATG CGTATATCCG TAAAGAGATT TCAAAAAAAG ACGCTGTTGC TTATTTTACA GATAAACAGG ATCCGTACAA ACTGGATTTG TTAGAAGGTC TTTCAGATGG CTCTATTACT TTCTACAAGC AAGGTGCCTT TACAGATCTT TGCAGAGGGC CGCACATTCC GGATACAGGA TTCATCAAGG CTGTAAAGCT GATGAGTGTT GCCGGTGCGT ACTGGAGAGG TGATGAAAAA AGCAAACAGT TAACACGTAT TTACGGTGTT ACGTTTCCTA AGCAGCAGGA GTTGAAAGAC TACTTAACTA TTCTGGAAGA GGCGAAGAAA CGTGATCATA GAAAATTAGG TAAAGAATTA GAATTGTTTG CGTTCTCTGA AAAAGTAGGA ATGGGCTTGC CGTTATGGTT ACCGAAAGGT GCTTTACTGC GCGAACGCCT TGAAAACTTT TTAAAGAAAG CTCAGGTACG TGCAGGTTAT CAGCCTGTAG TAACGCCACA TATCGGAAAC AAACAATTGT ATGTTACTTC AGGGCACTTT GATAAATATG GTAAAGATTC GTTCCAGCCA ATATTTACGC CGCATGAAGG TGAGCAGTTT CTGTTAAAAC CAATGAACTG TCCGCACCAC TGCGAGATAT ACAAAACAAA ACCGCGCTCC TATAAAGATC TTCCAATCCG TTTTGCAGAA TTTGGTACGG TATACCGATA TGAGCAAAGC GGAGAGCTTC ATGGGTTAAC CCGTGTAAGA GGCTTTACTC AGGATGATGC ACATATCTTT TGCAGACCGG ATCAGGTAAA AGAAGAGTTC TTAAAAGTTA TTGATCTGGT GCTTTATGTA TTTAAAGTAT TAGGCTTTAA CGATTACACT GCACAGATTT CGTTACGCGA TCCTGAGAAT AAAGACAAAT ATATCGGTGA AGATGAGCAG TGGCAAAAGG CTGAACAAGC CATCATTGAA GCATCCGCTG AGAAGGGTTT AAGTACAGTA ACTGAATTGG GAGAGGCTGC ATTCTATGGG CCGAAACTCG ATTTCATGGT AAAAGATGCA TTAGGAAGAA AATGGCAGCT GGGTACCATT CAGGTAGATT ATCAATTGCC AAATCGTTTT GAGCTTGAGT ACACAGGCTC TGACAACCAA AAACACCGTC CGGTAATGTT ACACCGCGCA CCATTCGGTT CATTAGAGCG ATTTATTGCC GTATTGATTG AGCACGTTGC CGGCAACTTC CCGCTATGGC TTTCTCCGGA TCAGATTGCA ATTTTACCAA TTTCCGAAAA ATTTAACGAT TATGCCCAGG ATGTATATGA CAGGCTTTTG GTTAAAGACA TTCGCGGGTT TATAGACAAC CGCGATGAAA AAATCGGTAA GAAGATTAGA GATACGGAAG TAAAAAAAGT GCCTTTTATG CTTGTAATAG GGGAAAAAGA AGTGAACGAA GGAAAAATTG CCATTCGTAA ACACGGTGGG GAAGATCTTG GAAGCATGTT GGTAGAAGAT TTTATTCAAT ATTTTGAATC AGAAATTGCA AAACAATTAG CAGTCTGA
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Protein sequence | MIKITLPDGS IREYEKGITS MGIALSISEG LARNVLAAKV NGEIWDASRA ITSDSTVQLL TWNDTEGKST FWHSSAHLLA EALEALYPGT KFGIGPAIET GFYYDVDFGD RAFSQDDFEN IEKKVLELAK QKNAYIRKEI SKKDAVAYFT DKQDPYKLDL LEGLSDGSIT FYKQGAFTDL CRGPHIPDTG FIKAVKLMSV AGAYWRGDEK SKQLTRIYGV TFPKQQELKD YLTILEEAKK RDHRKLGKEL ELFAFSEKVG MGLPLWLPKG ALLRERLENF LKKAQVRAGY QPVVTPHIGN KQLYVTSGHF DKYGKDSFQP IFTPHEGEQF LLKPMNCPHH CEIYKTKPRS YKDLPIRFAE FGTVYRYEQS GELHGLTRVR GFTQDDAHIF CRPDQVKEEF LKVIDLVLYV FKVLGFNDYT AQISLRDPEN KDKYIGEDEQ WQKAEQAIIE ASAEKGLSTV TELGEAAFYG PKLDFMVKDA LGRKWQLGTI QVDYQLPNRF ELEYTGSDNQ KHRPVMLHRA PFGSLERFIA VLIEHVAGNF PLWLSPDQIA ILPISEKFND YAQDVYDRLL VKDIRGFIDN RDEKIGKKIR DTEVKKVPFM LVIGEKEVNE GKIAIRKHGG EDLGSMLVED FIQYFESEIA KQLAV
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