| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1631 |
|---|
| Symbol | greA |
|---|
| ID | 4187008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1908702 |
|---|
| End bp | 1909178 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638071624 |
|---|
| Product | transcription elongation factor GreA |
|---|
| Protein accession | YP_678241 |
|---|
| Protein GI | 110638033 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0576288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00568101 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTA AAGTATCATA TTACACAGAA GAAGGTTTAA ACAAGTTGAA AAACGAGTTA
AGTCATCTTA AAACAAAAGG CCGTTCTCAA ATCGCTGCGC AGATTGCTGA AGCTCGCGAT
AAAGGTGACC TAAGTGAAAA TGCGGAATAC GATGCAGCAA AAGATGCTCA GGGTTTATTG
GAACTTAAAA TTTCTAAATT GGAAGAAATT GTTTCTAATG CCCGTTTATT AGATGAAAGC
ACTATTGATA CATCTAAAGC TTCTATTCTT ACAAAAGTAA AAATCAAGAA TAAGAAAACC
GGACATATTG TTGAGTATAC ATTGGTTTCT GAAGAAGAAG CGGACTTAAA AGCTGGCCGT
ATTTCGTTGA AATCTCCAAT TGGTAAAGCA TTGCTTGGTA GAGAAGTAGG CGAAACTGTT
TTGGTAGATG TACCTGCGGG TAAAATTGAA TTTGAAATTT TAGATATCGG AAGATAA
|
|---|
| Protein sequence | MSSKVSYYTE EGLNKLKNEL SHLKTKGRSQ IAAQIAEARD KGDLSENAEY DAAKDAQGLL
ELKISKLEEI VSNARLLDES TIDTSKASIL TKVKIKNKKT GHIVEYTLVS EEEADLKAGR
ISLKSPIGKA LLGREVGETV LVDVPAGKIE FEILDIGR
|
|---|
| |