| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1604 |
|---|
| Symbol | |
|---|
| ID | 4187080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1879187 |
|---|
| End bp | 1880782 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638071597 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678214 |
|---|
| Protein GI | 110638007 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.103561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.895852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATATGG CACTCCATAA AAAACTGAGC TTTATACTAT TTTTTATCGG AAGCATACAT
GTGTATGGAC AGACCAATTC ATACATTATT TATTTAAAAG ATAAAAACGG AACGCCGGGT
ACTATTCAGC AGCCATCCGC ATACCTTTCG GCACGCAGTC TGGAGCGTCG TCATCACGAA
CAGATCCGCA TTGATTCAAC CGACCTGCCT GTATCCGTTA ATTACCTTAC TGCTATAAAA
AATGAAGGTG CTTCAATTGT ATATTCCACT AAATGGTTAA ATGCAGTACA CATAAAAGCA
ACCGAAAGTC AATATAATAC CATACGTGCA TTCCCATTTG TTCTTGATGG TACAGGTAAT
TTTAAGGTAA CACAAAAAAG TAATGCACAG GAAATAACAG CAGCAACACA ACTCAACTAT
GCTCAAAATT ATACGGATTA CATGGGTATA ACAGATATGC ATAAGCAAGG CGTAAAAGGA
GCCGGTATAT TGATTGCTGT TACGGATTCC GGTTTTCCCG GTGTTGATAC GCTTACCGCA
TTTAAACATT TATGGGAGAA TAATCAGATT ACTTATTTTT ACGATGTTGC CGATAATGAA
GCTGATGTGT TCAATGACGG AAGTCATGGA ACCTACATCC TTTCTGTACT TGCGGCAGAT
ACATTAGTCT ATAAAGGTGT TGTGCCGGAA GCGTCGTATG TTTTATTACG TACAGAAGTT
GCTGCAACAG AAACACAAAC AGAAGAATTC AATTGGCTGC GTGCAGCCGA AATTGCAGAC
AGCTGCGGTG TTGATATCAT ATCTGTTTCT CTGGGTTATA CAACGTATGA TGACAATACG
GATAGTTATA CCTATGCAGA CATGGACGGG CAGACAAGTG TGATTGCGGC TGCAGCTGAT
ATGGCTTATG GAAAGGGAAT GATCGTTGTA TGCAGTGCCG GCAATGATGG AAATAATGCT
TGGAAATATA TTGGCACACC AGCCGATGCA AAAAAAGTAC TGGCTGTTGG TTCGGTAGAC
TTTACAAATA CAAAGTCCGG GTTTAGTTCA ATTGGCCCGA CAGCGGATGG CAGATTAAAA
CCTGATCTTT GTGCAACAGG AGCCGGGATC AACTGTATCA AGCCCGATGG CACAATCTTA
ATGACAGGTG GCACTTCCTT ATCTACACCA ATGATTGCCG GCATGATTGC CGGAATCAAA
CAAACATATC CATCCTTATC AAACGATGAG GTAAAAAATA TTTTACTGCA ATCGTGTGAT
AATTATTCCA ATCCTACAAA TTTAAAAGGC TACGGCGTTC CACACTTTTC AAGAACAGAA
TCCTATTTTA ATATTTACAT TAATCCGGTA AACAGTTTAA TTGCACCCAA TCCCTATCAT
TCAGGTCAGC TGATTATAAA AGTTCCTGAA CCGGAAGAAT CGTACGAAAT ACGCATGTAT
GACTATCAGG GTCAGCAAGT TTTTGAACAT TATTTTTTTT CATCCAATAA CATGATTTCG
ATTGAAAATT ATGTAAATAA TTTACAGGCA GGCATTTATT TGATTTATGT AAAATCTGCC
TATACAGCAG AAATTATTAA GTGGATTAAA TTATAG
|
|---|
| Protein sequence | MNMALHKKLS FILFFIGSIH VYGQTNSYII YLKDKNGTPG TIQQPSAYLS ARSLERRHHE
QIRIDSTDLP VSVNYLTAIK NEGASIVYST KWLNAVHIKA TESQYNTIRA FPFVLDGTGN
FKVTQKSNAQ EITAATQLNY AQNYTDYMGI TDMHKQGVKG AGILIAVTDS GFPGVDTLTA
FKHLWENNQI TYFYDVADNE ADVFNDGSHG TYILSVLAAD TLVYKGVVPE ASYVLLRTEV
AATETQTEEF NWLRAAEIAD SCGVDIISVS LGYTTYDDNT DSYTYADMDG QTSVIAAAAD
MAYGKGMIVV CSAGNDGNNA WKYIGTPADA KKVLAVGSVD FTNTKSGFSS IGPTADGRLK
PDLCATGAGI NCIKPDGTIL MTGGTSLSTP MIAGMIAGIK QTYPSLSNDE VKNILLQSCD
NYSNPTNLKG YGVPHFSRTE SYFNIYINPV NSLIAPNPYH SGQLIIKVPE PEESYEIRMY
DYQGQQVFEH YFFSSNNMIS IENYVNNLQA GIYLIYVKSA YTAEIIKWIK L
|
|---|
| |