| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1572 |
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| Symbol | |
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| ID | 4185606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1846349 |
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| End bp | 1847566 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638071566 |
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| Product | ABC transporter, permease |
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| Protein accession | YP_678183 |
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| Protein GI | 110637976 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00402772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.231871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATCTTT ATTACTTTAT ATCGTCAAGA ATACAAAAAA ATGATCGGCA GTCATTTTCG
TCCCTCGTTC ACAGGATCGC TGTCATCATT ATTTTTCTTG GTTTTTTATT ATCGGTTACT
TCGTTGTGTA TACTGGATGG TTTTAAAACC AGTATCCGTC AAAAGATTTT CAGTTTTGGA
GCACACATTC ATTTAACCAA ATATGATCTG GATAAATCGT ATGAGGAGTC GCCGTTTATT
ATTAATACCG GCACACTTGA TTCCATTAAA GCCATTCCTA ACATAGAACA CGTTCAGGGT
GTTTCGCATA AACCCTGTCT GTTAAAGTCT TCCTCTGAAA TTCAAGGTGT GATCTTAAAA
GGTGTTGGGC CTGATTTTGA TATTGATCGT TTTAAAAGCA ATATGCTGGA AGGCCGGTTT
ATTACGTTTA ACGATAGCGG TTATTCCAAA CAGATTGTTA TAAGTGAAAA AATTGCACAC
AAGCTTAATT TAAAAACCGG CGACAGTCTT TTACTGTATT TTGTGCAGAA TCCGCCGCGA
TACAGGAAGG TAAGCATTTC AGGTATTTAC AAGACAGGTC TGGAAGAACT GGATGAATTA
TTTATCATCG GTGATATACA ACTAAACAGA GTATTGAGCG CCTGGTCTCC GAAGCAGATA
GGCGGTCTTG AAATTTATGT ATCCGATTTT AATATGCTTG ATTCCACTGC AAGTGAAGTA
TACAAGCGTA TGGAGTATGA TATGCAGATT CAGCTGATAA CAGATAAGTA TCTGCAGATT
TTTGATTGGC TCAATCTGCT AAACAGAAAC GTTACAATCT TTTTAGCACT CATTATGGGT
GTTTCTATTT TTGTAATTAT CTCCACCATC ATTGTCATGA TCATGGAACG TACCTCTATG
GTTGGTCTGC TTAAAGCATT CGGAACCACG AACAGTGATG TGAGTAAAAT ATTCCTGTGG
AATGGATTTA AAATTATTAT TATCGGAATG CTTGGCGGGA ATGTGGTTGC GTTGACCTTA
TGTGCGCTGC AATACTATAC CGGCATTGTG CCCTTAGATG CGGAAAATTA TTTCATGAGT
GCAGTACCTA TTGCATTTCC ATGGTTTACA ATCATTGCTA TTAATATTGC AGCCTTGTTA
ACCCTTACAG CAATTCTCTG GATTCCTATC TATTTTATTT CCAGAGTGAG TCCGGTAAAA
GCAATAAAAT TCAATTAA
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| Protein sequence | MNLYYFISSR IQKNDRQSFS SLVHRIAVII IFLGFLLSVT SLCILDGFKT SIRQKIFSFG
AHIHLTKYDL DKSYEESPFI INTGTLDSIK AIPNIEHVQG VSHKPCLLKS SSEIQGVILK
GVGPDFDIDR FKSNMLEGRF ITFNDSGYSK QIVISEKIAH KLNLKTGDSL LLYFVQNPPR
YRKVSISGIY KTGLEELDEL FIIGDIQLNR VLSAWSPKQI GGLEIYVSDF NMLDSTASEV
YKRMEYDMQI QLITDKYLQI FDWLNLLNRN VTIFLALIMG VSIFVIISTI IVMIMERTSM
VGLLKAFGTT NSDVSKIFLW NGFKIIIIGM LGGNVVALTL CALQYYTGIV PLDAENYFMS
AVPIAFPWFT IIAINIAALL TLTAILWIPI YFISRVSPVK AIKFN
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