| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1556 |
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| Symbol | |
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| ID | 4185726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1812759 |
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| End bp | 1814594 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071550 |
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| Product | DNA helicase |
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| Protein accession | YP_678167 |
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| Protein GI | 110637960 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | [TIGR00376] DNA helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.274637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGG ATGCTAAAAT TTATGAAGAA GAACTTGCCA AACAATCCAT TCAGGAACGC
AAAGAACTTG GTATTACGTG GTATCCGTTA TTTATAAAAT CTGAATACTA TGGTTTTGCA
GAGCGCCTGC ACATTGAAGT TGAACGCAAA TACGAAGCGG ATACACCAAA TATTTTTTAT
TCAGGAGACA AAGTACGGAT CTTTTCAAAC CAGCAGCATA ATACAAAAGA AGATTTTATT
GATGGTGTAA TTACGGCGTC CGCCGGGAAT TTGGTAACCG TACAGCTGAT GAAAGATGAG
GCGCCGGATT GGCTTTCGGA TGGAAAGATC GGTATGGATA AACTATTTGA TAAGCATAGT
TATGAAACGA TGCTTTCAAC GCTTGATTAC TGGGCTTCAG ACGATGGATT AACAAAAGAT
TCGATCCGGT TACGCGATGT TATTTTAGGT GAAAAAACTG CTTCATTCAA TACAAAAGAA
AATTACGCAG CACCGGACAA GTTAGATATT ACACAAAAGA AAGCCTGGGA AAAAGCCATA
CAGGCGCAGG ATGTAGCAAT CATTCATGGA CCTCCGGGCA CAGGTAAAAC AACTACCATT
GTTGAAATAG TAAAAACTCT GATAGAAAAA GGGGAGCGTG TATTGGTTTG TGCTTCGAGT
AATGCGGCTG TTGATGTATT AACGGAAAGG CTTGCTGCCA GAGGCTTGCC GGTTGTACGA
TTGGGGAACC CTTCCAAAAT TACGGAGCAG AATCTGCAGT ATTGCCTGGA CCGGCAAGTT
GTGAATCACG AACAATTTGG TTTAGTGAAA GAATTGAAAA AACGTGCGGA AGAATTTTTT
CGCATGGCGA ATAAATACAA ACGGAATTTT GACCGGGAAG AACGGGAACA GCGAAAAGCC
ATCTTGAAGG AAGCCCGCAA TCTGCGTGGA CAAGCCGACG ATCACTTACA TTTTTTACAG
CAAAATGTAT TAGTAAAAAA TCAAGTGGTA ACGTGTACGC CTGTAGTTTC CATGCATAGA
GAGATTGGTA AAGAAAAATT TGACACGTTG ATTTTTGATG AATCGGGTCA AACCATGGAA
CCGATGTGCT GGATCCCGAT TCAAAAAGTG AAGAAAGTAA TTTTGGCAGG CGATCATTTA
CAACTGCCGC CAACAGTGAA ATCCGATGAA GCGGCGAAAA AAGGCCTGGC GATAAGTTTG
CTTGAAAAAT TAATGCCTTT GCCCGGTATT TCGGAAATGC TTGCCATTCA ATACCGCATG
AATGAAAAGA TCATGCAGTT TCCATCCCAA TGGTTTTATG ACAATAAACT GGAAGCACAC
GGCAGTGTTA AAGATCATGC CTTTGATGAC GATGTTATTC AGTTTATTGA TACGGCCGGA
ACAGGCTATG AAGAAGAACT GGTTGGAGCA CCGTTTGGTA TCCGGAATAA ACAGGAGGCA
GATCTTGTTC TTGCTATTTT GAATAACGTA GCTGAATTAA ATAAACAGGC AAGCATCGGA
ATTATCAGTC CGTATAAATT ACAGATTCAA TACATTCGTG AACAATTGAT CGAACAGAAA
ATCACGTCTA AAAATATTCA GGTACAAACC GTAGATGGTT TTCAGGGACA GGAGAAGGAT
ATTATTATTA TAAGTCTGGT ACGTTCCAAC GGAAAACAGG AGATCGGTTT TTTAAAAGAC
CTGCGACGCA TGAATGTTGC AATCACACGT GCACGTAAAA AGCTTATTGT TATAGGAGAT
TCGTCTACAT TGTCATCATC AAAATTTTAC GCCGGTTTTC AGGAATATAT TGAATCGCAT
AATGGGTATC ACTCAGCCTG GGAATATATC AGTTAA
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| Protein sequence | MSEDAKIYEE ELAKQSIQER KELGITWYPL FIKSEYYGFA ERLHIEVERK YEADTPNIFY
SGDKVRIFSN QQHNTKEDFI DGVITASAGN LVTVQLMKDE APDWLSDGKI GMDKLFDKHS
YETMLSTLDY WASDDGLTKD SIRLRDVILG EKTASFNTKE NYAAPDKLDI TQKKAWEKAI
QAQDVAIIHG PPGTGKTTTI VEIVKTLIEK GERVLVCASS NAAVDVLTER LAARGLPVVR
LGNPSKITEQ NLQYCLDRQV VNHEQFGLVK ELKKRAEEFF RMANKYKRNF DREEREQRKA
ILKEARNLRG QADDHLHFLQ QNVLVKNQVV TCTPVVSMHR EIGKEKFDTL IFDESGQTME
PMCWIPIQKV KKVILAGDHL QLPPTVKSDE AAKKGLAISL LEKLMPLPGI SEMLAIQYRM
NEKIMQFPSQ WFYDNKLEAH GSVKDHAFDD DVIQFIDTAG TGYEEELVGA PFGIRNKQEA
DLVLAILNNV AELNKQASIG IISPYKLQIQ YIREQLIEQK ITSKNIQVQT VDGFQGQEKD
IIIISLVRSN GKQEIGFLKD LRRMNVAITR ARKKLIVIGD SSTLSSSKFY AGFQEYIESH
NGYHSAWEYI S
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