| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1512 |
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| Symbol | |
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| ID | 4183990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1743645 |
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| End bp | 1748012 |
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| Gene Length | 4368 bp |
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| Protein Length | 1455 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638071505 |
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| Product | cation efflux protein |
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| Protein accession | YP_678123 |
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| Protein GI | 110637916 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[P] Inorganic ion transport and metabolism
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein
[COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.631882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.42011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATA AAATCATTCA TTTCTCAATA AAAAACAAAC TCATAATTGG TGTCTTTACA
TTGGCATTAA TTATTTGGGG ATGTTGGTCA GCAACAAAGC TGCCTATTGA TGCCGTACCT
GACATCACAA ACAATCAGGT ACAAGTAATC ACTTCAAGTC CATCACTGGC TGCCCAGGAA
GTGGAAAGGT TAATTTCATT TCCTGTAGAA GTTAACATGG CTAACATACC TGGCTTAATA
GAAGTGCGTT CTATTTCCCG CTTTGGGCTA TCAGTAGTAA CAGTTGTCTT TGATGATGCA
ACAGATATTT ACTGGGCAAG ACAACAGGTG TCAGAAAGAC TGAAATCTGC TACCGATCAA
ATACCTAAAG GTGTTGGTGT CCCTGAAATG GGGCCGGTAA GTTCTGGCCT AGGGGAAATT
TATCAATACG TGATACATCC TAAAAAAGGC TACGAAAACA AATATACTCC AATGGAACTC
CGTACGATTC AAGACTGGAT TGTACGAAGA CAATTATTGG GAACGAAAGG TGTAGCTGAT
GTAAGTAGTT TCGGAGGGTT TGTAAAACAA TACGAAATAT CAATAAATCC GGATAAGCTG
CGTAGTATGA ATATTACGAT AGGAGAAGTT TTTTCAGCCT TAGAAACAAA TAATCAAAAT
ACGGGCGGAG CTTATATTGA TAAGCAACCA AACGCTTGGT TTATAAGAAC AGAAGGTCTT
GCTACTTCAA TAGAAGATAT TCAAAAAGTA GTAGTGAAAA ATACAAACAA TGGCACCCCC
ATTCTTATTC GTGATGTAGC TGTAGTACAA TTTGGACATG CCGTCCGTTA TGGAGCTATG
ACAAGGAATA ACGATGGTGA AGTGGTAGGT GCGATTGTTA TGATGCTTAA GGGAGCTAAT
TCGAATGAAG TAATAGGCAA CGTTAAAGAA CGAATTGAGC AGATAAGAAA AACGCTTCCT
GAAGGTGTTG AGATCGAAGC TTTTCTTGAC AGAACAAATT TAGTTAATAG AGCAATTCAT
ACAGTATCTA AAAACTTGAT TGAAGGTGCT CTTATAGTAA TTTTTGTACT TGTTTTATTT
TTAGGAAATC TTCGTGCTGG TTTAGTAGTA GCATCTGTCA TACCATTAGC AATGCTATTT
GCACTTTCTA TGATGAATCT TTTTGGGGTT TCAGGAAACT TAATGTCTCT AGGTGCAATA
GATTTCGGAT TAATCGTTGA TGGAGCTGTA ATTATTGTAG AAGCAACCTT ACATCATATT
GTAAGCAAGC GATACACTCA TAAGCTTTCT CAAGATGAGT TAGACAACGA AGTATTTGAA
TCCGCTTCCA AAATCAGAAA CTCTGCTGCT TTTGGAGAAA TCATTATACT CATTGTATAT
CTTCCAATTC TTGCTCTTGT TGGTATTGAA GGTAAAATGT TTAAACCGAT GGCGCAAACA
GTAGCCTTTG CAATATTAGG TGCTTTCATA TTGTCTCTTA CTTATGTGCC AATGATTTCA
GCATTGCTTT TAAGTAAAAA CCCATCTCAT AAGAAAAATA TTTCAGATAA GATGATGGAT
TTTTTCTACA AAATTTATTC CCCTGCTATT CATTTTGCCA TCAAAAGAAA AATAGCTGTG
GTATTAACAT CCCTCCTGCT TTTTGCAGTG AGCTTATTTA TTTTCATGAA TATGGGTGGT
GAATTTATAC CAACATTAGA TGAAGGTGAT TTTGCCGTTG AAACTCGTGT ACTAACTGGA
AGTTCAATGA TGGAAACAGT AGATGCTTCT TTAAAAGCTG GAGAAATTTT AACAAAACAA
TTTCCAAATG AAGTGAAGGA AGTAATCGGA AAAATTGGTG CCGGAGAAAT CCCCACTGAT
CCGATGCCCA TTGAAGCATG TGATTTGATG GTCATACTAA AAGATAAGGA TGAATGGACA
AGTGCAACCA CACGCGATGA GCTGGCCAAT AAGATGCAGG AAGCGTTAGA AGATATTCCT
GGGGTAAATT TTGGTTTTCA GCAGCCTATA CAGATGCGAT TCAATGAACT CATGACCGGG
GCAAAACAGG ATGTAGCTAT CAAAATTTAT GGTGAGGATT TGGATATACT CACACAACAA
GCAAATCAAC TCGGTAAAAT CATACAGACA ATCAATGGTG CTAAAGATTT GTATGTCGAA
AAGGTAACAG GATTACCACA AATACTTGTA AAATTTGATA GAGATAAGGT AGCACAATTT
GGTTTAAACA TTGAGGAGAT GAATCGAATT GTAAGTACAG CTTTTGCTGG CGAGTCAGCA
GGTGTTATAT ATGAAGGTGA AAGACGTTTT GATTTGGTAT TAAGGTTGAA TAAAGAAAAC
CGTCAGAGCA TTGAAGATGT ACAAAACTTA TTTGTAACAA CTGCTGATGG CCATCAAATT
CCGTTGAGCC AGATTGCAGA AATAAGCTTT AAAGTAGGTC CAAATCAAAT ACAGCGTGAT
GATACAAAAC GACGTATTAC AGTCGCATTT AACGTTAGAG GAAGAGATGT TGAAAGTATT
GTTAAAGAGA TACAGGATAA AGTACAAGCG CAATTAAAAC TTCCTTCAGG ATACTATTTA
ACCTATGGTG GACAGTTTAA AAACTTAGTA GAAGCTAAAG CTCGCTTATC TGTAGCTGTA
CCTATTGCAA TGGCTCTCAT ATTTATATTG CTGTATTTTA CTTTCAATTC CTTTAAGCAA
AGCATTCTGA TTTTTACAGC TATCCCTCTT TCTGCTATTG GTGGTGTGTT TGCCTTATGG
TTGCGTGATA TGCCTTTCAG TATTTCGGCA GGTGTAGGTT TCATTGCCTT GTTTGGAGTA
GCAGTATTAA ACGGCATCGT TTTATTAGGT GAATTTAATA GTCTTAAGAA AGAGGGTTTA
ACTAACCTAA CAGATATTAT ATTAAAAGGA ACCCAAACAA GATTAAGACC CGTTCTTATG
ACTGCGACAG TTGCTTCCCT AGGCTTTTTG CCTATGGCAT TGTCTCATGG GTCTGGAGCT
GAGGTACAAA AGCCTTTGGC AACTGTTGTA ATTGGAGGAT TATTGTCTGC AACATTACTT
ACTTTATTAG TATTGCCCGT GTTGTATATC CTGTCTGAAA ATGGATTCAA ATTTAAGACT
CCTAAAGTTG CTGTAATACT AGTGCCTCTA CTATTTATGA TGGGAATGCC AAGCTTATTA
AAAGCGCAGG CTCCTCAAAT CCTTTCTTTG GAACAGGCAA TGCAAACTGC TGTGCAAAAT
AATTATAGTA TAAAAGCAGC TCAGTATAAC GTTGATTATA ATAAAAATTT AAAAGGGACA
TCAACGGATA TAGGAAAGAC GAGCGCTACT CTTATGTATG GGCAGTATAA TAGTTATTAC
AATGACAATA ACTTTACGAT TTCACAAACA ATACCATTCC CTACTACTAT GCACAGACAA
GCTCAGTATT ACAATGCTGC ACTTAAAAGT GCAGAATATA ATAAGGACAT GTCAGAAAAT
GAATTGATAC GAAATGTTAA AACTGCATAC TATGCATTGC AATTTTCAAA AGCACGCAGA
ACTTTTTTAC TAAAGCAGGA TAGCATTTTT GTTGTCTTCC TTAGGTCAGC AGATCTTCGC
TTACGAACAG GAGAAAGCAA TGCGTTGGAA AAAGCTACTG CTGAAAGCCA GCTGTATGAA
ATTCGGACAT TAATTGCACA GAATGATGCA GATATTATCA TTTATCAGAA TCAACTTAAA
ACACTGCTGA ACACGAATGA TGATATTACC ACCCAGGGGA TTACTCTTGA TAAAAGAACG
CTGTTAATTG GTGCGGATTC AGCTGCTGTA AACGGCAATC CGGCATTACG TTATTTTACT
CAACAGGTAC AAGTTGCTGA AGCGGCTAAA AATGTGGAAC GTTCACGTTT GATGCCCGAC
ATTACCTTGG GATATTTTAA TCAAAGCTTA TACGGCACAC CTAATTATCA AGATCCTACA
GTCGTTGCGA ATGGGACTAG TCGTTTTCAG GGTGTAACGA TAGGTGTTGC CATTCCTATT
TGGGCCAAAC CTCAGTTAGC TAAAATTAAG GCTAATGAAG CATATAAAAA TGTAGCACAA
GCCAATTTGG ATCTTTACGA AAAAAACTTA CAAGGTGAAT ATGCTCAAGC GTTTCAGTCA
TATTTAAAAT TCAAAAACAG TCTTGAATAT TATGAAACTA ATGCGCTACC TACAGCCGAC
ATTATAACCA AAAATGCGTT GGCTAACTAC CAAAGCGGCA ACATCGGTTA TATTGAATTC
TCTCAAGGCT TAAACAGAGC CTTAAGTATT CAGACAAATT ACTTAGACAT TGTAAGCCAA
TACAATCAAT CAATCATTAA CATTGAATTC CTTATCGGAA ATAAATAA
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| Protein sequence | MLDKIIHFSI KNKLIIGVFT LALIIWGCWS ATKLPIDAVP DITNNQVQVI TSSPSLAAQE
VERLISFPVE VNMANIPGLI EVRSISRFGL SVVTVVFDDA TDIYWARQQV SERLKSATDQ
IPKGVGVPEM GPVSSGLGEI YQYVIHPKKG YENKYTPMEL RTIQDWIVRR QLLGTKGVAD
VSSFGGFVKQ YEISINPDKL RSMNITIGEV FSALETNNQN TGGAYIDKQP NAWFIRTEGL
ATSIEDIQKV VVKNTNNGTP ILIRDVAVVQ FGHAVRYGAM TRNNDGEVVG AIVMMLKGAN
SNEVIGNVKE RIEQIRKTLP EGVEIEAFLD RTNLVNRAIH TVSKNLIEGA LIVIFVLVLF
LGNLRAGLVV ASVIPLAMLF ALSMMNLFGV SGNLMSLGAI DFGLIVDGAV IIVEATLHHI
VSKRYTHKLS QDELDNEVFE SASKIRNSAA FGEIIILIVY LPILALVGIE GKMFKPMAQT
VAFAILGAFI LSLTYVPMIS ALLLSKNPSH KKNISDKMMD FFYKIYSPAI HFAIKRKIAV
VLTSLLLFAV SLFIFMNMGG EFIPTLDEGD FAVETRVLTG SSMMETVDAS LKAGEILTKQ
FPNEVKEVIG KIGAGEIPTD PMPIEACDLM VILKDKDEWT SATTRDELAN KMQEALEDIP
GVNFGFQQPI QMRFNELMTG AKQDVAIKIY GEDLDILTQQ ANQLGKIIQT INGAKDLYVE
KVTGLPQILV KFDRDKVAQF GLNIEEMNRI VSTAFAGESA GVIYEGERRF DLVLRLNKEN
RQSIEDVQNL FVTTADGHQI PLSQIAEISF KVGPNQIQRD DTKRRITVAF NVRGRDVESI
VKEIQDKVQA QLKLPSGYYL TYGGQFKNLV EAKARLSVAV PIAMALIFIL LYFTFNSFKQ
SILIFTAIPL SAIGGVFALW LRDMPFSISA GVGFIALFGV AVLNGIVLLG EFNSLKKEGL
TNLTDIILKG TQTRLRPVLM TATVASLGFL PMALSHGSGA EVQKPLATVV IGGLLSATLL
TLLVLPVLYI LSENGFKFKT PKVAVILVPL LFMMGMPSLL KAQAPQILSL EQAMQTAVQN
NYSIKAAQYN VDYNKNLKGT STDIGKTSAT LMYGQYNSYY NDNNFTISQT IPFPTTMHRQ
AQYYNAALKS AEYNKDMSEN ELIRNVKTAY YALQFSKARR TFLLKQDSIF VVFLRSADLR
LRTGESNALE KATAESQLYE IRTLIAQNDA DIIIYQNQLK TLLNTNDDIT TQGITLDKRT
LLIGADSAAV NGNPALRYFT QQVQVAEAAK NVERSRLMPD ITLGYFNQSL YGTPNYQDPT
VVANGTSRFQ GVTIGVAIPI WAKPQLAKIK ANEAYKNVAQ ANLDLYEKNL QGEYAQAFQS
YLKFKNSLEY YETNALPTAD IITKNALANY QSGNIGYIEF SQGLNRALSI QTNYLDIVSQ
YNQSIINIEF LIGNK
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