Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1492 |
Symbol | umuC |
ID | 4185389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1719517 |
End bp | 1720779 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638071485 |
Product | DNA repair nucleotidyltransferase/DNA polymerase |
Protein accession | YP_678103 |
Protein GI | 110637896 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00564635 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000128837 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTATGCAT TAATTGACTG CAATAATTTC TACGCAAGCT GTGAAAGAGT ATTCAATCCT TCACTGAACG GAAAGCCCAT AGTCGTATTA AGTAATAACG ATGGCTGTGT GATTGCAAGA AGCAACGAAG CAAAGGCTCT GGGCATTGAC ATGGGAGGAG CGTATTTTAT GATTGAAGAA GCATTAAAAA AACATAATGT ATTTGTGTTC TCTTCTAATT ATACTTTGTA CGGTGATATG TCACAACGGG TAATGAATAC ATTGGCTGAA TTTACACCCG AGATTGAAGT ATACAGTATC GACGAATCTT TTCTAAACTT TGAAGGCTTT GAATTGCTTG GGGATTTAAA GATTTATGGT ACAACAATCC GTAATACAGT TTTTCGCAAT ACAGGTATTC CGGTATCAAT AGGCATTGCC CCTACAAAAG CTCTTGCCAA ATTATCCAAT AGGATCGCAA AGAAGAATAA GGAATATAAT CATGTTTGTG TGCTTGATTC ACAGGAGAAA ATAATGGCAG CCTTAAAGAT TACAACTGTA GATAATATCT GGGGAATAGG TCGTGCATAT CATAATTTTC TTTTGAATCA TGGAATACAA ACTACTTATG ATTTTGTTCA GCAGCCCGAA GAGTGGGTTA GAAAAAATAT GTCAGTGGTC GGATTAAGAC TTCACAAGGA ATTGAAGGGT GAAAAATGCC TAGAGCTAGA GTTAGTAGCT ATGGCAAAAC AGAATATTTG TACTTCCAGA AGCTTTGGCA GATACTTAAC GGATATTGAC CCAATAAAAG AAGCAATGAG CAATTTTGCA TCACGCTGCG CTTTAAAGCT TAGAAAAGAT AAGTCTGTAT GCACGTTGGT ACAAATCCTA TTACATACCA ATAAGCATAA GCCTGATCAG CCACAATATT TTGTTAATAA AGTAATCACA TTGCCTGTGC CAACTAATAG CACCATCGAA CTTATACAGG CATCATTGCG CGCATTGGAT TTGGTTTATA AACCAGGATA CAGATATATG AAATGCGGAG TGATCGTGTC AGGTATTGTT CCGGAAGATC GTGTTCAACA AAATCTTTTC GATACAGTAG ATAGAAGCAA GCACAACAAG GTTACTACGA TCATGGACAA GTTAAATAAG TCCTTAGGTG CAGATTTTGT AAAAGTAGGA TCGTTAGGTG TTACAAAGCA ATGGCATCTT AAGGCTGAAA AATTGAGTCA ATGCTACAGC ACAAGGTGGG ATGAGATAAT TGTAATTAAG TAA
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Protein sequence | MYALIDCNNF YASCERVFNP SLNGKPIVVL SNNDGCVIAR SNEAKALGID MGGAYFMIEE ALKKHNVFVF SSNYTLYGDM SQRVMNTLAE FTPEIEVYSI DESFLNFEGF ELLGDLKIYG TTIRNTVFRN TGIPVSIGIA PTKALAKLSN RIAKKNKEYN HVCVLDSQEK IMAALKITTV DNIWGIGRAY HNFLLNHGIQ TTYDFVQQPE EWVRKNMSVV GLRLHKELKG EKCLELELVA MAKQNICTSR SFGRYLTDID PIKEAMSNFA SRCALKLRKD KSVCTLVQIL LHTNKHKPDQ PQYFVNKVIT LPVPTNSTIE LIQASLRALD LVYKPGYRYM KCGVIVSGIV PEDRVQQNLF DTVDRSKHNK VTTIMDKLNK SLGADFVKVG SLGVTKQWHL KAEKLSQCYS TRWDEIIVIK
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