Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1482 |
Symbol | |
ID | 4185555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1712703 |
End bp | 1713287 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638071475 |
Product | hypothetical protein |
Protein accession | YP_678093 |
Protein GI | 110637886 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000904161 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00236642 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAGG CTAAGAAAAG AAAACGCACA ACTTCCCGAT CAAGAACACG GACACGAAGA ACTTCCTCCG CTTCTGCCCC ACTAGTCCTT ACAAAAGAAG TTTCAAGAAA AGAAATTGGT GTTGCAGTGC TTTCATTCTT TGGAGGTACA ATTATTGGCG CAGCACTCGG CAAATACTCA GGTCTGGGAG GCTTAGCAAT TGCGGGGCTC GGAGCATGGA AGAAAAACAT GTATGCTACC AGCCTTGGTG CAGGAATGTT TTTAAGCACA GTTCCAAAAC CAATGGGTGA TGCTACCAAT GGGATTTCCG ATGAAGAAAT GGAAGGCGTC AGTATTGCTT CTATCAAGGA AAACACGAAG AACTATTTTC AGACACTTGC AAGCAAACTT ATGCTTAAGT CTTCAGAAGG TACAAACGGG TTAAGTGGCG AAGACGATGT AACCTATTTC ATCAATCCAT ATACGCAAGG ATCCGGTAAG CTTGATACAA GAGAGCTCGA CCGCATACAG GAACAGATTG CCCAGATGAA CAACCCTGTT AACGGCACAT TCGGAGAGCC TGATTTCACA GAGCGAAACT TCTAA
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Protein sequence | MAKAKKRKRT TSRSRTRTRR TSSASAPLVL TKEVSRKEIG VAVLSFFGGT IIGAALGKYS GLGGLAIAGL GAWKKNMYAT SLGAGMFLST VPKPMGDATN GISDEEMEGV SIASIKENTK NYFQTLASKL MLKSSEGTNG LSGEDDVTYF INPYTQGSGK LDTRELDRIQ EQIAQMNNPV NGTFGEPDFT ERNF
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