Gene CHU_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1482 
Symbol 
ID4185555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1712703 
End bp1713287 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content45% 
IMG OID638071475 
Producthypothetical protein 
Protein accessionYP_678093 
Protein GI110637886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000904161 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00236642 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAGG CTAAGAAAAG AAAACGCACA ACTTCCCGAT CAAGAACACG GACACGAAGA 
ACTTCCTCCG CTTCTGCCCC ACTAGTCCTT ACAAAAGAAG TTTCAAGAAA AGAAATTGGT
GTTGCAGTGC TTTCATTCTT TGGAGGTACA ATTATTGGCG CAGCACTCGG CAAATACTCA
GGTCTGGGAG GCTTAGCAAT TGCGGGGCTC GGAGCATGGA AGAAAAACAT GTATGCTACC
AGCCTTGGTG CAGGAATGTT TTTAAGCACA GTTCCAAAAC CAATGGGTGA TGCTACCAAT
GGGATTTCCG ATGAAGAAAT GGAAGGCGTC AGTATTGCTT CTATCAAGGA AAACACGAAG
AACTATTTTC AGACACTTGC AAGCAAACTT ATGCTTAAGT CTTCAGAAGG TACAAACGGG
TTAAGTGGCG AAGACGATGT AACCTATTTC ATCAATCCAT ATACGCAAGG ATCCGGTAAG
CTTGATACAA GAGAGCTCGA CCGCATACAG GAACAGATTG CCCAGATGAA CAACCCTGTT
AACGGCACAT TCGGAGAGCC TGATTTCACA GAGCGAAACT TCTAA
 
Protein sequence
MAKAKKRKRT TSRSRTRTRR TSSASAPLVL TKEVSRKEIG VAVLSFFGGT IIGAALGKYS 
GLGGLAIAGL GAWKKNMYAT SLGAGMFLST VPKPMGDATN GISDEEMEGV SIASIKENTK
NYFQTLASKL MLKSSEGTNG LSGEDDVTYF INPYTQGSGK LDTRELDRIQ EQIAQMNNPV
NGTFGEPDFT ERNF