| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1466 |
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| Symbol | dpnA |
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| ID | 4185539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1701195 |
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| End bp | 1705334 |
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| Gene Length | 4140 bp |
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| Protein Length | 1379 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638071459 |
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| Product | SNF2 family helicase |
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| Protein accession | YP_678077 |
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| Protein GI | 110637870 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.942792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0166873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATG TACTGTTCCG TAACGGTGTG TTGCCTGCTT CCTACAATGA AATAGCCCTA
GTAGAAGATT GGTTGGAATC ACACTCTGTA TCAAATGAAC CGCTAAGGTT TAGCGAACTG
TGCCGATACA ACACCTGGTT CAATCTGCAT CCGGAAAAGA TAGCAGGAAA AGAAATCACT
TCTACATCAA TTCAATTTCC CTTAACCATT AATGGAAGCA AGGAAGATGT TATCCGAACG
ATCCATGAAT CCATTACACC GAAAGTAACT ATGTCCTTAA AAGAAAAAGC CCTTCTGTTC
AAAAAGTCAT TCCAGTCAGA TCTCTCCTCT GACTGGAATG ACTTATCAGG CTTAGAGGAT
CTTGGTGAGC TTGTACAACA GGAAATTACT TCCAATCTTG AAGTACTCAA AAAGGCTGTT
GAAGATTCAC GTCAGGAAAA AACATATACT GCTTCCGATA AACTCTCCTT TGAAGAGGTA
GTTTCGCTTT ACAATAAAGG CATCTCAGAA GATGAAATCA TTGCATGGGT TTGGTATAAG
CGCAGCTTAG GCATAACAAT GAAAGGCTGG GAAAAGTATT TCTTAGCAGA CACCGGACAG
GCAGGTGAAA TGGTTTACAC CGTTAAAGCA ACTCTAATTA AAGACAATCA TTTCAGAGAC
ATAGCCGAAG TGGGTGCTAA TATATTTTTA GGAAAACCAA CACGGTTTAA AAATGAATAT
GCAGGTGTTG TATACATCAT TTTCACAGCT ATCAATGGCG ACAAGCAATA TGTAGCTGAA
AAAGATATTC GTATTGATAA GACATCCATT AAAACAGATC CAGCTTCGTT AGATGCCCTT
GTAAAAAAAG GTGTTCTGTT CTATCATCAG GGTGACCTTA TGCCATACCC AATTTATGCG
TATGGTAATA TGTATGATCG TGAATTGGAA CTTAAAAAAG ATAAAGATTA CATTATTTCA
ACTTACGGAG CACAGGTTTA TAGCAGTCAT GAAGAAATTA TAGTAAAAGC TAAACCAGAG
CTATTAAGCA TCTTTAATGC AGACGAAAAG ATGCGTCCTA AAATACTTTC GATTTCAGGT
TTTGCTGATG AATTTATAAT TCATGATCTA AAAGAGGAAA CAGGTATTGA GCTAGAACCA
AGAGATCATG GACACACATT AACGGGTGCG TTTTATTTTT ACTTACAAAG CCTTTCCAGA
GAACAGTTCA AAACTTCTAC AGCTTTTGAT ATTTGGACGT ACCATGTTCA AAGCAAAAAA
ATCATAGATA AGGATCTTTC TGAAGAACAA CGCAAAGAGC TTAGAGCAAA CGCCCGTAAT
GAGGGTGAAG AATTGTTCAG TCGCTTTCTA TTTGAAGGAC TAACATTTAC AGACCAGGAA
AAACTAAACC TATCCTGGAA CAGAATTTAT AATGGACAAT CTTCTATTGC CTATCACAGA
ATACCGATTG GCTTTGAGTG TTCTGCTAAA TTTAAGCAGT TCAATCTTCA CTTCACTCCT
GCCCAGCGTG AAGGTGTAGC TTTTATGGAA GCTGTAGGGA GTGGTATCGT AGCTTATGAT
GTTGGCGTTG GTAAAACTAT GACAGCCATC ATAGCTTTGG CACAAGCTAT ATACAGCGGC
AAAGCGGTGC GTCCACTAAT TGTTGTACCC AATCCCACAT ATGGAAAATG GATCAAAGAA
ATTATCGGCT ATACTGATCC TGCCAGCAAA GAATTTATTC CCGGTGTTCT ATCAAACACT
GGCATTGAAC TCAATGAGTG GTACAATCTT GGAACAGATT TATTGAAAAA TCTTGACCTG
ACTAAAAAGA TCAAGGCTAA AACGATAACC ATTCTTACCT ATGAAGGATT TAAAAAGATT
GGCTTTTCAG AAAAGGTCAT GGATCAGATG TTTGTCGAGC TGACAAATGT TTTATACCAG
TCCAGTGAAA AGTCCGCTCG TGACAAAGAA ATTGATTATC AAAAATACCG TGAAAAGATT
GGTGTTGGAT TAAAAGGGAC GGAAGCTGAT ATAGACACGC TTGGCATTGA TTACATCGTA
ATAGATGAGG CGCATAGATG CAAGAACATC TTTGAAGGCG TAAAGGCAGA CGAAGACGGT
AAGAAACGAT TTGGCATAAC AGGTGCTGTA AGTGAAACTG GTATTAAGGC TTTCTTTCTG
TGCAACTATA TCCAGCGTAC TTATGGAAGA AACGTAATGC TTTTAACAGC TACACCTTTT
ACCAATAGTC CGCTTGAAAT TTATTCCATG CTTTCCCTGG TTGCATATGA AAGCATGAAG
AAACTAGGCA TCTATAACAT TCATACTTTC TTTGAATTGT TTGTGCTGGA GCGCACTGAG
TATGTAGTCA ATTACAAGGA AGAGATTGTG CCAAAGGATA CGGTTAAATC CTTTAACAAC
CGCATGCTTC TTCAAAAGCT GATCTACAAT CATATCAATT ATAAGACCGG AGAAGAAGCA
GGCGTGAAAC GTCCTTGCAA AATTAACCTG CCACGCATCA ATACATATGA GAACGGTAAG
GTGAAGCGAC TTCCACCAGC GCAACAGGTA CTCACCTACC TTGCTATGAC TCCGCTTCAA
CGTCAAAACC AAAACGAAAT TACTGCTCTA GCAAAGAGTG CAACAAACGG ACAGCTAAAT
ATGTCTGCAA TATTCCGTGC CTTGAACTTT AGCCTTGATA ATGCATTAAG TCCTTTTCTA
TATGCAGATA CTCCCGCAGA TTACAAGGAG TTTGTAGATG AATCGCCAAA AATTAAATAC
GTTCTTGAAT GTATTGCTTC AGTAAAACAA TGGCATGAAG AACGTAAGCA GGAAGTATCC
GGTCAGGTTA TTTATTTGAA CCGTGGTAAG AGCTTCTTTG CATTCATTAA GGAATATTTA
GAAAAAGAAA CCGGCTATAA AAAAGGAGTA AAATGGAACC GCATTGCTTT AGACGAAGTG
GAGATCATTA CTTCTGAAAT GAGTCAGGCT AGAAAAGAAA ACATCAAGGA AGCGTTTCTT
GATGGTGCCG TAAAGATTAT AATTGGCACG GCTACGATTC GTGAAGGTAT TGATTTGCAG
CGTAAAGGAA CTGTCATCTA TAATTGTTAT CCAGACTGGA ATCCGACCGA TATACGGCAG
CTCGAAGGAC GTATCTGGCG CCAAGGAAAT GAGTTCGGTT ATATCCGATC TGTGATGCCA
CTGGTGCAGG ATAGTATGGA CGTGTTTGTC TTTCAAAAGT TGGAAGAAAA AACCAGCCGG
ATCAATGACA TCTGGTATAG AGGCGACAGA GGTAATGTAC TTGACTTAGA AGCGTTAGAT
CCAGAGGAAG TAAAGTTTGC ATTGATCACA GACATTGAAG TCATCGCAAA CATGAAGCGG
AAAATACTCA AAGCAGAAAT GGAACGTAGG CTAAACATTG TGAACGGTAG CCTTGATACA
TTAGCACGCT TTGATATTAT CCTTAGGCGT TTCTTTGTTT TACGCCAGCA AGCAGTTGAG
CATTTAGGTA AAGCAAAAGT TAGATTATCT GAAATTGAAT TCACTCAATT CAGCTATCAG
CGTTACACGG CTAAAGAGAT CGACGCTGTA AAAGAAGAAG TAAGAGAAAC GATGCTCGCT
ATTGAAATGT TTCTTGAATC TTCAACTCAA ACAGATAAAG AACTGTTACG CCTGGGACGA
ATTCTTTTAA AAGGCATCTA TCCTGTTGAT ACACGCAACC ATTATCTGTT CTCTGAATAC
AAGCAGTACC TGTCCAATGT TAAGAAAGCT GAAAAAACAA TCCTATCACA AAAGGGATTT
ACGATCAACG ATAACATACA GGAAATTATT GGTGCTTACA AAAGAGATCA GGGAGCTATT
GAAGCGGAAA TCAGTCATGC TGAATCGGAT GAATTCTTTG AAACCTTGAA AAGAGAAGCC
ATTCAAAAAA AATCAGCAAT GGCAGTAAAT GGTGCTACAG TAGAGGAAAG AGCGGCAGAG
TTTGCAAGAC TAAATTACCT GCTCTCTTAT AAGTCCATGG ATGTAGCTTC TGACAGCTGC
ATTCTTCCTG ATAAAGAACG TGTTATTACT CATATTAATG ACAATGATCT TCGAAAGCGG
AAATTAAAGC TAAAAGCCAA AGCACTGAAA TTAAAACTGA CTCTACAAAA CGCTGCCTGA
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| Protein sequence | MDHVLFRNGV LPASYNEIAL VEDWLESHSV SNEPLRFSEL CRYNTWFNLH PEKIAGKEIT
STSIQFPLTI NGSKEDVIRT IHESITPKVT MSLKEKALLF KKSFQSDLSS DWNDLSGLED
LGELVQQEIT SNLEVLKKAV EDSRQEKTYT ASDKLSFEEV VSLYNKGISE DEIIAWVWYK
RSLGITMKGW EKYFLADTGQ AGEMVYTVKA TLIKDNHFRD IAEVGANIFL GKPTRFKNEY
AGVVYIIFTA INGDKQYVAE KDIRIDKTSI KTDPASLDAL VKKGVLFYHQ GDLMPYPIYA
YGNMYDRELE LKKDKDYIIS TYGAQVYSSH EEIIVKAKPE LLSIFNADEK MRPKILSISG
FADEFIIHDL KEETGIELEP RDHGHTLTGA FYFYLQSLSR EQFKTSTAFD IWTYHVQSKK
IIDKDLSEEQ RKELRANARN EGEELFSRFL FEGLTFTDQE KLNLSWNRIY NGQSSIAYHR
IPIGFECSAK FKQFNLHFTP AQREGVAFME AVGSGIVAYD VGVGKTMTAI IALAQAIYSG
KAVRPLIVVP NPTYGKWIKE IIGYTDPASK EFIPGVLSNT GIELNEWYNL GTDLLKNLDL
TKKIKAKTIT ILTYEGFKKI GFSEKVMDQM FVELTNVLYQ SSEKSARDKE IDYQKYREKI
GVGLKGTEAD IDTLGIDYIV IDEAHRCKNI FEGVKADEDG KKRFGITGAV SETGIKAFFL
CNYIQRTYGR NVMLLTATPF TNSPLEIYSM LSLVAYESMK KLGIYNIHTF FELFVLERTE
YVVNYKEEIV PKDTVKSFNN RMLLQKLIYN HINYKTGEEA GVKRPCKINL PRINTYENGK
VKRLPPAQQV LTYLAMTPLQ RQNQNEITAL AKSATNGQLN MSAIFRALNF SLDNALSPFL
YADTPADYKE FVDESPKIKY VLECIASVKQ WHEERKQEVS GQVIYLNRGK SFFAFIKEYL
EKETGYKKGV KWNRIALDEV EIITSEMSQA RKENIKEAFL DGAVKIIIGT ATIREGIDLQ
RKGTVIYNCY PDWNPTDIRQ LEGRIWRQGN EFGYIRSVMP LVQDSMDVFV FQKLEEKTSR
INDIWYRGDR GNVLDLEALD PEEVKFALIT DIEVIANMKR KILKAEMERR LNIVNGSLDT
LARFDIILRR FFVLRQQAVE HLGKAKVRLS EIEFTQFSYQ RYTAKEIDAV KEEVRETMLA
IEMFLESSTQ TDKELLRLGR ILLKGIYPVD TRNHYLFSEY KQYLSNVKKA EKTILSQKGF
TINDNIQEII GAYKRDQGAI EAEISHAESD EFFETLKREA IQKKSAMAVN GATVEERAAE
FARLNYLLSY KSMDVASDSC ILPDKERVIT HINDNDLRKR KLKLKAKALK LKLTLQNAA
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