Gene CHU_1453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1453 
Symbol 
ID4184009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1683041 
End bp1683817 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content33% 
IMG OID638071446 
Producthypothetical protein 
Protein accessionYP_678064 
Protein GI110637857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.55452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.529403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAATTA CATCAGACAA CAATACTATT AATAATATGA AAGAAGATAA ACTTGCTGTA 
TTAATTGACG CAGACAACGT CCCTTATTCA AATGTCAAAG AGATGCTTGA AGAAATTTCA
AAAAACGGGA CACCTACTAT TAAAAGAATT TATGCTGATT GGACAAAACC GACTGTTTCA
GGCTGGAAAA GCGTCCTTTT GGAAAATGCA ATTACTCCAA TTCAACAATA CAGTTATACA
ACTGGCAAAA ATTCGAGCGA CAGTGCTTTG ATAATTGATG CCATGGATAT TTTGTATTCA
GGAAAGGTAA ACGGTTTTTG TATTGTTTCC AGCGATAGCG ATTTCACAAG ATTAGCTACA
AGACTTAGAG AGGCTGGAAT GACAGTTATT GGATTTGGTG AGAAGAAGAC ACCTAAGCCT
TTTATTTCTG CGTGCGACAA ATTTATATAC ATAGAAATAT TAAAAGCATC TTCTGTTGAG
ACAAAGGTTA TTACAAAACC TGATGAGAAA TTGAAAAAGG AAGAACCTAT CAGCAAAGTA
GATAATGAAA CAATTCGAGT AATAACAGAA AGTGTAAATG ATTTAGCGGA TGAAGCAGGT
TGGACATTTT TAGGGAGTTT GGGTAACTAC ATCCTTAAAA AGAAGCCAGA CTTTGACCCA
AGAAATTATG GATTTCCTAA ACTGTATCCG TTAATTAAAG ATATTGATAA ATTTGAACTT
GACGAAAGAG AAACAGGAAT AAAAAACATT AGACATATAT ATTTAAAAGA AAAATAA
 
Protein sequence
MVITSDNNTI NNMKEDKLAV LIDADNVPYS NVKEMLEEIS KNGTPTIKRI YADWTKPTVS 
GWKSVLLENA ITPIQQYSYT TGKNSSDSAL IIDAMDILYS GKVNGFCIVS SDSDFTRLAT
RLREAGMTVI GFGEKKTPKP FISACDKFIY IEILKASSVE TKVITKPDEK LKKEEPISKV
DNETIRVITE SVNDLADEAG WTFLGSLGNY ILKKKPDFDP RNYGFPKLYP LIKDIDKFEL
DERETGIKNI RHIYLKEK