Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1429 |
Symbol | tolB |
ID | 4186226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1655233 |
End bp | 1656174 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638071422 |
Product | tol biopolymer transport system, periplasmic protein |
Protein accession | YP_678040 |
Protein GI | 110637833 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.435538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.112486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCTATC ACCTTCTAAC ATTACTTATG TATTCACGCA TTGTTTTTTC ATTTTTCTCC ATCGGTTTCT TTTTAAGTTG TCAGCCGGAT AATCCAGAAG AAGTAGTTCG GGTACAAAGC ACCTTAGAAA TCTTTTCGCT TGATTCAGGC ACACGGCAAA TCATTTATCA GGCAGACGAA AACGTTGAAG CACCGAACTG GTCGCGCAGC GATAGCTTTC TTCTTTTCAA CATGAAAGGT GAAATATACC GTATTCCAAC TACTGGCGGC ACGCCGGTTA AAGTAAACAC GGGCTTTGCG ACACATTGTA ATAACGATCA CGGAATTTCT CCTGACAACA AACAATTAGT TGTTAGTCAT CACGAAAAAG AAAGCGGTAA ATCCATGATC TATACCATGC CGATCGGTGG CGGTGAACCG AAGCTGATCA CACCGAACGC GCCTTCCTAC TGGCACGGCT GGTCTCCGGA TGGAAATACA CTAGCTTATT GTGCAGAACG CAACGGCGAA TTCGATATCT ATACCATTCC TGCTAATGGC GGTACAGAAC AACGACTGAC AGATGCAGCA GGCCTGGATG ATGGCCCGGA TTATACCGCG GACGGAACAT ATATTTATTT CAATTCCGTT CGTACAGGAA AAATGAAAAT CTGGAGAATG AAACCGGATG GTTCCGAACA GGAACAGGTG ACATTTGATG ATTACAATGA TTGGTTCGCA CACCCATCAC CGGATGGGAA ATACATTGTG TTTGTATCCT ATGAACCCGA AGTCGAAGGA CACCCGGCCA ATAAAAATGT CACGTTACGC TTAATGCCCA TGCAAGGCGG CGAACCAAGA GTGATCGCTA AACTTTTCGG CGGACAAGGT ACGATCAATG TTCCGTCGTG GTCGCCCGAC AGCAAACGAT TTGCTTTTGT GAGTTATAAA ATCCTCCCCT GA
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Protein sequence | MFYHLLTLLM YSRIVFSFFS IGFFLSCQPD NPEEVVRVQS TLEIFSLDSG TRQIIYQADE NVEAPNWSRS DSFLLFNMKG EIYRIPTTGG TPVKVNTGFA THCNNDHGIS PDNKQLVVSH HEKESGKSMI YTMPIGGGEP KLITPNAPSY WHGWSPDGNT LAYCAERNGE FDIYTIPANG GTEQRLTDAA GLDDGPDYTA DGTYIYFNSV RTGKMKIWRM KPDGSEQEQV TFDDYNDWFA HPSPDGKYIV FVSYEPEVEG HPANKNVTLR LMPMQGGEPR VIAKLFGGQG TINVPSWSPD SKRFAFVSYK ILP
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