Gene CHU_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1422 
Symbol 
ID4184264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1651721 
End bp1652311 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content34% 
IMG OID638071415 
Producthypothetical protein 
Protein accessionYP_678033 
Protein GI110637826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00130273 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0953844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CATTCATAAC AATTATTTTT TCAATTCTTA CAACAGTTTT TTCAATACAT 
TCATACGCAG AAACCCATAC ACAAAAAGAT TCAATCGAAA CATGTTCCGT TGCAACATCG
TTCTTTGATT GGTATTTAAA TTCAATAAAA GGGCGTTCAT TTTCTGCGTA TAAGCCAGCA
TTTATTCAAG CGCCAAACGG AACTACCACC TTAGATTTTT CAGGTTATAT CAGCAATCTT
AAGCAACATC ATTTTTCTGA CTCTTTGCTT AATGTGGAAA AAAACGCGTA TCAGCCATGT
ATTTCTAACC TGTCCAAAAT TAAGTATCAG GATTTTATTG CATATACAGA CTTAGATCAG
TTTGAGGCAA TAAACTGCGA CTTTGAAAAT GTCTACAAGT GGCTCCATAC ACAGGAAGCA
CCGGATGTAA CGGCAGTAAA ATCTATCCGG TTTATTACCC AGGAAAATGC CGTAGTAACA
ATAATGTTGG GTAGTTATAT TTCCAAAGAC AAAACGTATT CGTATTACAG TTCTTTACTT
GTTTATATGA AAAAGATAAA CAATACCTGG TTAATCAATG GCATTCGATA A
 
Protein sequence
MKNTFITIIF SILTTVFSIH SYAETHTQKD SIETCSVATS FFDWYLNSIK GRSFSAYKPA 
FIQAPNGTTT LDFSGYISNL KQHHFSDSLL NVEKNAYQPC ISNLSKIKYQ DFIAYTDLDQ
FEAINCDFEN VYKWLHTQEA PDVTAVKSIR FITQENAVVT IMLGSYISKD KTYSYYSSLL
VYMKKINNTW LINGIR