Gene CHU_1390 details

Gene Information

• Locus tag: CHU_1390
• Symbol: ygcM
• ID: 4185286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cytophaga hutchinsonii ATCC 33406
• Kingdom: Bacteria
• Replicon accession: NC_008255
• Strand: +
• Start bp: 1611146
• End bp: 1611571
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638071383
• Product: 6-pyruvoyltetrahydropterin synthase (6-pyruvoyl tetrahydrobiopterin) synthase
• Protein accession: YP_678001
• Protein GI: 110637794
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0720] 6-pyruvoyl-tetrahydropterin synthase
• TIGRFAM ID: [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCATAT ACGTATCCAG ACAAGAACAT TTTAACGCAG CACACAAACT ATATAATCCG 
GCCTGGTCGG AGGAAAAAAA TGCTGAAATG TTTGGGCCAT GTGCAAATTC AAACTGGCAT 
GGCCATAATT TTGATTTGAT TGTTACAGTA AAAGGTGAGC CGAGCCCTGA CACAGGGTTT 
GTCATTGACC TTAAAAAATT AAGCACCCTG ATCCGTGAAA AAGTAACGGA TAAAGTAGAT 
CATAAAAATC TGAATCTGGA TGTAGATTTT ATGATCGGAA AAATGGCCAG TACAGAAATA 
CTGGCGTATG AATTCTGGAA GATACTTGAA CCGCATATCA CAACACTTTC TGATGGCAGA 
GGTAAGCTGC ATTCAATCAA ATTGTATGAA ACACCACGCA ACTACGTGGA ATATTTCGGC 
GAGTAA 

 

Protein sequence

MIIYVSRQEH FNAAHKLYNP AWSEEKNAEM FGPCANSNWH GHNFDLIVTV KGEPSPDTGF 
VIDLKKLSTL IREKVTDKVD HKNLNLDVDF MIGKMASTEI LAYEFWKILE PHITTLSDGR 
GKLHSIKLYE TPRNYVEYFG E