Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1383 |
Symbol | |
ID | 4185456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1605510 |
End bp | 1606814 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638071377 |
Product | transport protein |
Protein accession | YP_677995 |
Protein GI | 110637788 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.283032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTAT TCTATATTTG CGTTACCCTT TTTCTCGTTA TTTTAAATGG TTTTTTTGTT GCCGCCGAAT TTGCCATTGT AAAAGTCCGT TCCTCACAAC TGGAAGTTAA AGCTGCAACG GGCAACTCCC GGGCGCAGGT TTCTTTAACG ATTCTTGAAA ATTTAGATGC CTATTTATCT GCTACTCAAT TTGGTATTAC TTTAGCCAGT CTCGGATTAG GCTGGGCAGG AGAGCGGGTT GTAATGCCTT TGGTGCTGAT TGTGTTTGAC CTGATGTCAA TTTCATTGCC GGAATTATAC ATGCATGAAA TTTCGATTGT TATCTCATTT ACATTCATAA CAATCATGCA CATTGTTTTT GGGGAGCTTG CCCCTAAGTC AATTGCTATT CAGCGTGCAG AAGATGTTAC ATTAGCCATC GCCTATCCAT TAAAAGCTTT TTATCTGATT TTCAAACCAT TTATCTTTTT ATTAAATGGC TTTGCTACAT TCATCCTTAA GATCTCCGGA TTCGCCAGTG TTGGAGAAAA AGAACTGCAT TCAGCGGAAG AACTTGAATT ACTTATTGAT CAGGGGAAAA TGAGTGGTGC ATTGAATCCA AATGAGCATC AGCTTATTAA AAATGTCTTC GGCTTTATTG ATGTTACCGT TCGCCAGGTT ATGACGCCGC GTACCAGCAT CAACGCAATT GATATTGATC TGCCGTTGGA ATATGTGTTG AATAAAATAG TAAATGAAGG GTATTCAAGG CTACCTGTAT ATAAAGACAA CATCGATAAT ATAATAGGTA TTTTATATAC CAAAGATCTG TTGAAGATGA TGAATAAAGG GGAACAGATT AAGCTGCAGT CAGCCATGCG GCAGCCATAC TTTGTTCCTG AAACAAAAAA AATAAATGAA CTGCTCAAAA ATCTTCAGGC TAAGCATTTA CACATGGCTA TTATTATAGA TGAGTTTGGT GGTGTATCCG GAATCACTAC CATTGAGGAT ATCATTGAAG AACTGGTCGG TGAAATTCAG GATGAGCATG ATGATGAAGC ACCTGTTGTA GAACAGGTTT CAGCGAATGA GTTTGTGGTA AATGCGCTCG CAAACATACA GGATGTGAAT GAATGGTTAC CTGTTCCGTT ACCCGAAGGA CCTGAATACG ATACCTTAGC CGGCTTACTC ATTAAGATCT TTACACGGAT TCCGGATTTA AGTGAAAAAC TAACGTTTGA AGGATATCAA TTCACAATTT TGAAGAAAAA TAAACAAAGC ATTTTACTGG TTAAAGTCCA TAAACTGGAA GAAGAAGCGC AATAA
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Protein sequence | MILFYICVTL FLVILNGFFV AAEFAIVKVR SSQLEVKAAT GNSRAQVSLT ILENLDAYLS ATQFGITLAS LGLGWAGERV VMPLVLIVFD LMSISLPELY MHEISIVISF TFITIMHIVF GELAPKSIAI QRAEDVTLAI AYPLKAFYLI FKPFIFLLNG FATFILKISG FASVGEKELH SAEELELLID QGKMSGALNP NEHQLIKNVF GFIDVTVRQV MTPRTSINAI DIDLPLEYVL NKIVNEGYSR LPVYKDNIDN IIGILYTKDL LKMMNKGEQI KLQSAMRQPY FVPETKKINE LLKNLQAKHL HMAIIIDEFG GVSGITTIED IIEELVGEIQ DEHDDEAPVV EQVSANEFVV NALANIQDVN EWLPVPLPEG PEYDTLAGLL IKIFTRIPDL SEKLTFEGYQ FTILKKNKQS ILLVKVHKLE EEAQ
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