Gene CHU_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1375 
SymbolnuoH 
ID4185448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1598597 
End bp1599625 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content39% 
IMG OID638071369 
ProductNADH dehydrogenase I chain H 
Protein accessionYP_677987 
Protein GI110637780 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00938294 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAC CCGTTGAGTT TTTACTTGAA AAAACAATCA TTGTTACTGC CGTTTTTACC 
ATATCGCTGG TAATAGCAAT GTACAGTACA TACGCAGAAC GTAAAGTTTC AGCGTTACTT
CAGGACCGTA TCGGCCCGAA TAGAGCGGGG CCATTTGGTT TGCTACAGCC GTTGGCAGAT
GGTGTTAAAT TCTTTATGAA AGAAGAGATT ATTCCTTCTT CTGCAAACAA AGCACTGTTT
ATCCTTGGGC CTTCTATTGC CATGATGACT GCCTGTTTAA CAGGAGCGGT TATTCCATGG
GGAAGTTATC TGGAGATCGG CGGCGATCAG ATAGCGCTGC AGGTAACAGA CATCAATATT
GGTGTGCTTT ATATTTTCGC TGTTGTATCG ATTGGTGTAT ACGGTGTAAT GATCGGTGGC
TGGGCTTCTA ATAATAAGTT CTCTTTAATG GGTGCTATAC GGGCTTCTTC TCAAATGATC
AGTTATGAAA TTGCAATGGG TTTATCCATC ATTGCTTTAG TAATGACAAC AGGAACATTA
AGTATCGGTG AAATTGTTCA GCAGCAGACA ACAGATTGGT GGAACATTGT TTATCAGCCA
TTGGGTTTCT TCATCTTTAT GGTATGTTCA TTCGCAGAAT GCAACAGAAC TCCATTTGAC
TTACCTGAAT GTGAAGCGGA ACTTATCGGC GGATATCATA CAGAATATTC ATCCATGAAA
TTAGGGTTGT ACTTATTCGC AGAATACATC AACATGTTTA TCTCTTCTGC CGTAATGAGT
GCATTCTACT TCGGCGGGTA TGATATTCCG TATATCGAAA CACTTGGTTT AGATCAGAAT
ACAGTAACCA TTTTAGGTAC GCTGTTCTTC TTTACAAAAA TCGTCTTATT CATATTCTTA
TTCATGTGGG TTAGATGGAC ATTACCACGT TTCCGTTATG ATCAGCTAAT GAATCTTGGT
TGGAAGATTA TGATTCCGAT GGCTATCATA AATATTATTA TTACTGGTGC ATGTATATTG
TTATTCTAA
 
Protein sequence
MEIPVEFLLE KTIIVTAVFT ISLVIAMYST YAERKVSALL QDRIGPNRAG PFGLLQPLAD 
GVKFFMKEEI IPSSANKALF ILGPSIAMMT ACLTGAVIPW GSYLEIGGDQ IALQVTDINI
GVLYIFAVVS IGVYGVMIGG WASNNKFSLM GAIRASSQMI SYEIAMGLSI IALVMTTGTL
SIGEIVQQQT TDWWNIVYQP LGFFIFMVCS FAECNRTPFD LPECEAELIG GYHTEYSSMK
LGLYLFAEYI NMFISSAVMS AFYFGGYDIP YIETLGLDQN TVTILGTLFF FTKIVLFIFL
FMWVRWTLPR FRYDQLMNLG WKIMIPMAII NIIITGACIL LF