Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1368 |
Symbol | dedA |
ID | 4185441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1591757 |
End bp | 1592422 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071362 |
Product | integral membrane protein |
Protein accession | YP_677980 |
Protein GI | 110637773 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.377957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTT TCGAATTATA CCATAACATT ACCAATCCAG AGGTAATCAT TAAAACAGGA GGATTATTTT TAATCCTCCT TATCATTTTT GCGGAAAACG GCGTATTCTT TGGTTTCTTT TTACCAGGCG ATACCTTGTT GTTTACGACC GGCTTATTGT CTTCTACAGG TAAGTTTGAT GTGCCTATTG TAACCCTGCT GATCAGTATT TCCATAGCCG CCTATCTGGG CAGTTTATTC GGATATTTTT TCGGGGAAAA AACAGGAAGC AGGCTCTTTA CCAAAGATGA TTCCCTTTTC TTTAAGAAAA AATACATGTT TGCTGCTGAA GCATTCTTTA TCCGTTACGG TGCCGTAGCC TTAATCATGG CCCGTTTCCT TCCTATTATC CGTACCTTTG CGCCAATTTT CTCTGGTATC GTCCGGTATC CGTACGGTAA ATTCCTGCTT TATAACATCA TTGGCGGAAC ACTTTGGGTG GTGAGCCTTG TTTACGGCGG CTACTTATTA GGACAGGTTG TTCCGGAATC AAAAGATTAT CTGGAACATA TAATTCTTGG CATCATCATT ATAACCTGGA TACCTGTAGT TGTTACCTAT ATAAAAGAGC GTAATCGGGC TAAAAAAGCA GCAGAAATTA CAACTGATTC AAATTCTGAC CGTTGA
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Protein sequence | MDIFELYHNI TNPEVIIKTG GLFLILLIIF AENGVFFGFF LPGDTLLFTT GLLSSTGKFD VPIVTLLISI SIAAYLGSLF GYFFGEKTGS RLFTKDDSLF FKKKYMFAAE AFFIRYGAVA LIMARFLPII RTFAPIFSGI VRYPYGKFLL YNIIGGTLWV VSLVYGGYLL GQVVPESKDY LEHIILGIII ITWIPVVVTY IKERNRAKKA AEITTDSNSD R
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