Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1334 |
Symbol | |
ID | 4185839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1550480 |
End bp | 1550938 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071328 |
Product | hypothetical protein |
Protein accession | YP_677946 |
Protein GI | 110637739 |
COG category | [S] Function unknown |
COG ID | [COG4276] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00812663 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTACAGAC TGGAAAGAAC ACAGCGTTTG CCGATTTCAA TAGATGAAGC CTGGGATTTT TTTGCTTCCC CGGATAATCT GAAAAAAATA ACACCTGCTT ATATGGGGTT TGATATAAAA TCGGGAGGCG GTATACCGAT GTATGCAGGC ATGATTATAA AATATACCGT TAGACCGTTA TTGGGGATAC CGATGACGTG GGTAACAGAG ATTACACATG TAGAGCCACA ACGTTTTTTT GTAGATGAAC AGCGTGTAGG GCCATATGCT ATCTGGCACC ACCAGCATCA TTTTAAAGCT ATTGAAAACG GGGTTGAAAT GACGGATATA TTACATTATA AATTACCCTT TGGCATATTG GGAAATCTGG CTCACCCGTT TCTTGTGAAA AATAAGCTGG AAGAAATTTT CAACTTCCGT AATAAAAAAA TGGTTGAACT CTTTGGTACC TATAAATAG
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Protein sequence | MYRLERTQRL PISIDEAWDF FASPDNLKKI TPAYMGFDIK SGGGIPMYAG MIIKYTVRPL LGIPMTWVTE ITHVEPQRFF VDEQRVGPYA IWHHQHHFKA IENGVEMTDI LHYKLPFGIL GNLAHPFLVK NKLEEIFNFR NKKMVELFGT YK
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