Gene CHU_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1333 
SymbolfolE 
ID4185838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1549747 
End bp1550430 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content37% 
IMG OID638071327 
ProductGTP cyclohydrolase I 
Protein accessionYP_677945 
Protein GI110637738 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00848552 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACTTAG TACATATGAA AATTACAAAA GCGGTACATA TTGAAAAGGA AGAGCTGAAT 
GATGATCATT ATTCATCCAA TCCGGAAACA CCATTGCGGG TTGATGCATT TGAATTAGAG
GATGATATCA AAGTGGAATT AATCAGCAGG AAATTTAAGG ATATCATGGA AATTCTTGGT
TTGGATCTTT CTGATGATAG TTTGAAGGAT ACGCCGAACC GTGTAGCAAA AATGTATGTA
AAGGAAATAT TCAGCGGCTT GAATCCATTG AACAAACCAG CTGTGGCTTT GTTTGAAAAT
AAATACAAAT ACGATGAAAT GATTCTGGAA AAGAACATTA CATTTTATTC CAACTGTGAG
CATCATTTTG TTCCTATTAT TGGAAAGGCT CATGTTGCTT ACATTTCCAA TGGAAAGGTA
ATTGGTTTGT CAAAACTCAA CAGAATCGTT GATTATTTTG CAAGACGCCC GCAAGTGCAG
GAACGATTAA CGGTACAGAT TGCAAATGAA TTGAAGTCTA TTCTGGGAAC AGAAGATGTT
GCAATTGTAC TGGATGCAAA ACATTTATGC GTTTCCATGC GCGGTGTGAA AGATGAAGCC
AGCTCAACGG TTACGGCGCA TTACTCCGGA AAGTTTAAAG AAGAAGGGGT TAAAAATGAA
TTCCTTGCAT ATATAAAGGA CTAA
 
Protein sequence
MNLVHMKITK AVHIEKEELN DDHYSSNPET PLRVDAFELE DDIKVELISR KFKDIMEILG 
LDLSDDSLKD TPNRVAKMYV KEIFSGLNPL NKPAVALFEN KYKYDEMILE KNITFYSNCE
HHFVPIIGKA HVAYISNGKV IGLSKLNRIV DYFARRPQVQ ERLTVQIANE LKSILGTEDV
AIVLDAKHLC VSMRGVKDEA SSTVTAHYSG KFKEEGVKNE FLAYIKD