Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1320 |
Symbol | napA |
ID | 4186130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1533598 |
End bp | 1537128 |
Gene Length | 3531 bp |
Protein Length | 1176 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638071314 |
Product | periplasmic nitrate reductase/nitrite reductase |
Protein accession | YP_677932 |
Protein GI | 110637725 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG1251] NAD(P)H-nitrite reductase [COG3383] Uncharacterized anaerobic dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0472235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAT CTACAAAAAC ATATACCTCA ACCTGCTCGT ATTGCGGTGT TGGTTGTGGT GTTAAAATTC ACAAAGCGGT TAATGGCAGT CTTCAGATAG AAGGCGATAA ATCGTATCCT GCAAACCAGG GCATGCTGTG TTCAAAAGGC ATGAACTTAC ATTATGCCGC CATGGATCAG ACAGACCGTT TGTTATATCC TGAAATGCGT GGAAACAGAA ACATGCCGTT GCAGCGTGTT TCCTGGGATA CCGCGCTGGA TAGAGCTGCT GCAGTATTCA AAGCATTGAT CGAAAAATAT GGTCCGGATT CAGTGGGATA CTATGTGTCC GGACAATGTT TAACAGAAGA ATATTATATC GCAAATAAAA TCACCAAAGG TTTTATTGGT ACCAATAACA TAGACACTAA TTCCAGGTTG TGCATGAGCT CGGCGGTGGT AGGGTATAAG CTTGCCTTGG GCGAAGACTC TGTACCGCTG AGTTATGACG ATATTGAACT GGCAGACTGC TTTTTTATAA CAGGAGCAAA CCCGGCCTGG TGTCACCCGA TTTTATTCCG CCGTCTGGAA AATCATAAAG CGGCCAACCC GCATGTGAAG ATCATCGTTG CTGATCCGCG CAAAACGCAA TCCTGTTCCT TGGCAGATGT GCATTTGCAA TTACAGCCGG GCACAGACAT TGTATTGTGT CATGCGATTG CACGCCGGTT AATTGAAACA GGAAAGATCG ATCAGGCTTT TATTGATGCC CATACCAGCG GATATGAAGC ATTCAAAGAA AAAGTTTTTA CGTTAAGCCT TCAGGAAGCG GCTGATATCT GTGTATTGGA AAAAGAACTG ATCATTCAGG CAGCAGATAT GATCGGCGAT TCCCAGGCCT TTATCAGCAT GTGGGCGATG GGCCTGAATC AAAGTGTTAT TGGTGTAAAT AAAAATGTTT CACTTCTGAA TTTATCGTTA ATAACAGGGC AGATTGGCAA GCCGGGCGCA GGACCGTTGT CTTTAACCGG ACAACCGAAT GCGATGGGTG GAAGAGAAGT TGGCGGCTTG TCCAATATGT TACCTGCACA TAAAAACTTA TTAAATCCAG CACACAGAAA GGAAGTAGCA GATTTCTGGG GTGTACCTGC TATCAATGAA AAGCCTGGAT TTACTGCTAC AGAAATGTTT GATCAGCTGC TTTCCGGAAA AATGAAAGCT GTATGGATCA TTTGTACAAA CCCATTGGTG AGTCTGCCCG ATGCACGAAA TGCAGAAGCT GCGTTGCGTA ACGCACGTTT TGTTGTTGTG CAGGATATTT CAAATAAATC CGACACGTTG AAATATGCAG ACCTGGTGCT GCCTGCTGCT GCGTATATGG AGAAGGAAGG CGTGATGACA AATTCCGACC GGCGGATAAG TTATCTTTCC AAAGTAATGG AGCCGCCGGG TGAAGCCTTG CCCGATGTTG ACATTCTGTG CCGGTTTGCA CACAAGATGG GCTGGAAAGA ATCATTTAAT TATGCATCCA ATGCAGAAAT ATTTGAAGAA TATACGCGTA TCACCAAAGG TACGAATATT GATATAAGCG GTTTGTCGTA TGCAGACCTG ATTCAGCGGA GAAGCGTACA ATGGCCCGTT CCGGAAAAAG GTCATCCGGG TACACCGCGT TTATTTACCG ATCATACATT TTATACACCT ACCGGTTTAG CCAATATTAT TTCAGTGGAT TCTATGAATC ACTCTGAAAA ACTGGATGAT GATTTTCCGC TGATCCTTAC AACGGGACGC ATCCGTGATC AATGGCATAC CATGACACGT ACGGGTAAAG TACGTAAATT GAACAAGCAC ATTTCAAAAC CCTTTCTGGA AATCCATCCG GAAGATGCCG GAATAAGAGG AATTAAACAG GATGATGTTG TTACGATAGA AAGCAGAAGA GGGGATGTAC GGGTAACAGC TATTCTTACC GAAGATATAA AAAAAGGCGT AGTGTTTTTA CCCATGCATT GGGGAAGGAT GTTAAGCACA GACCTGACGC GTACAAACAA TGTAACCAAT AATTTAATTG ATCCGGTTTC TAAAGAGCCG GACTATAAAT TCACAGCGGT GCAGGTTACA AAATATGTAA AACCGCGGGA ACATATTGTT ATTGTTGGTG CCGGTGCTGC TTCGTGTCAG TTTATCAAAC GCCATCGTGA ATTAGGTGCG GAAGATACAA TAACAGTTTT CAGCGCAGAA AATTTTCATT TTTATAACAG AGTTTTATTG CCGGAATATG TAAGCAAACA TAAAAGCTGG GATAATTTAG AAAAGCTGCG TAAAGCAGAA TGGCTGGAGT TGGGTGTAAC CCTGATTCCA CGGAAAATAA CCAGGCTGAT CACAGAATCA AAATCGATTG TTGATGATAC CGGAGAAGTA CATTGTTACG ATCGCTTACT GGTAGCAACC GGAAGCCGGT CCACACAGAT GAAACATATT GCTCCGGTTA AAGGCATCTT TACCATGAGA AGGAGAGAAG ATGCAGATGC ATTGATTCAT CATCTTTCTA CGGGAGACTC TGTTGTTGTT GTTGGTGGTG GTTTGCTGGG TTTAGAGATG GCCGACTCCC TGCTAGAAAT TGGTATGAAG GTTTCTGTTA TTCAGCGTTC ATCCAGGTTA ATGGACCGGC AGCTGGATAA GACAGCAGCC AATCTGTTAG CGAAAGAGTT AACAGAACGG GGCATGGATC TGTACTTTGA TGATGAAGTA TTGTATGTAA ACGGTGAATA TGCAGTTGAA AGTCTGCGTT TGAAAAGCAG TCGCAAGATT GATTGCAAAG CTATTCTGTT TGCGATTGGT ACGCAACCCA ATGTAGAGTT TCTGAAAGAG GCCGGGATAC AGGTAAACAG AGGAGTGATC GTGGATGAGC ATTTACAGAC ATCGAATGAA TTTGTATATG CAATGGGTGA AATTGCAGAA CGTAATGGAG CGTTATTTGG TATCACTGCC GGTGCAGAAG AACAGGCTAC TGTTCTTGCT GAATATCTGA ATGGAAGTAC TACTTCAAAT TATACCGGTA CGTTAAGTAT GAACATACTG AAAGTACACG GGGTTGAGTT ATGTTCCATT GGTATGGTTG AAGCACCTCC TAATAATCCG GATTATGAAG AAATTATTTT CCTTGACAAA ACACGAAAGT ATTATAAAAA ATGTATTGTG TATCAGGACC GTCTTGTTGG TGCAATTCTG ATGGGAGATA AATCTGAGTT TAATGAATTC AGAGACTGGA TAAAGTCTGG CGTAGAACTT GGTGAAAAGC GCGAAAGCCT GTTGATGTCC GGGAGCATAT CAAAAGAACC GATGCTGGGA ACGCTGGTTT GTTCCTGCAA TACTGTTGGC AGTGGGAATA TTGAAAATGC CATCAAAGGC GGCTGTAAGG ATGTGACTTC CATTTGTAAT ACGACCGGAG CCGGTACTGG CTGCGGCAGC TGCAAGCCGG AAGTTAAAGC AATATTGGAG CGTATGCATG CAGTAACAGA ATCATCTAAC TCACAAAAAA CGTATGCCTA A
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Protein sequence | MSQSTKTYTS TCSYCGVGCG VKIHKAVNGS LQIEGDKSYP ANQGMLCSKG MNLHYAAMDQ TDRLLYPEMR GNRNMPLQRV SWDTALDRAA AVFKALIEKY GPDSVGYYVS GQCLTEEYYI ANKITKGFIG TNNIDTNSRL CMSSAVVGYK LALGEDSVPL SYDDIELADC FFITGANPAW CHPILFRRLE NHKAANPHVK IIVADPRKTQ SCSLADVHLQ LQPGTDIVLC HAIARRLIET GKIDQAFIDA HTSGYEAFKE KVFTLSLQEA ADICVLEKEL IIQAADMIGD SQAFISMWAM GLNQSVIGVN KNVSLLNLSL ITGQIGKPGA GPLSLTGQPN AMGGREVGGL SNMLPAHKNL LNPAHRKEVA DFWGVPAINE KPGFTATEMF DQLLSGKMKA VWIICTNPLV SLPDARNAEA ALRNARFVVV QDISNKSDTL KYADLVLPAA AYMEKEGVMT NSDRRISYLS KVMEPPGEAL PDVDILCRFA HKMGWKESFN YASNAEIFEE YTRITKGTNI DISGLSYADL IQRRSVQWPV PEKGHPGTPR LFTDHTFYTP TGLANIISVD SMNHSEKLDD DFPLILTTGR IRDQWHTMTR TGKVRKLNKH ISKPFLEIHP EDAGIRGIKQ DDVVTIESRR GDVRVTAILT EDIKKGVVFL PMHWGRMLST DLTRTNNVTN NLIDPVSKEP DYKFTAVQVT KYVKPREHIV IVGAGAASCQ FIKRHRELGA EDTITVFSAE NFHFYNRVLL PEYVSKHKSW DNLEKLRKAE WLELGVTLIP RKITRLITES KSIVDDTGEV HCYDRLLVAT GSRSTQMKHI APVKGIFTMR RREDADALIH HLSTGDSVVV VGGGLLGLEM ADSLLEIGMK VSVIQRSSRL MDRQLDKTAA NLLAKELTER GMDLYFDDEV LYVNGEYAVE SLRLKSSRKI DCKAILFAIG TQPNVEFLKE AGIQVNRGVI VDEHLQTSNE FVYAMGEIAE RNGALFGITA GAEEQATVLA EYLNGSTTSN YTGTLSMNIL KVHGVELCSI GMVEAPPNNP DYEEIIFLDK TRKYYKKCIV YQDRLVGAIL MGDKSEFNEF RDWIKSGVEL GEKRESLLMS GSISKEPMLG TLVCSCNTVG SGNIENAIKG GCKDVTSICN TTGAGTGCGS CKPEVKAILE RMHAVTESSN SQKTYA
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