Gene CHU_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1297 
Symboldfr 
ID4184860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1509998 
End bp1510528 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content36% 
IMG OID638071291 
Productdihydrofolate reductase family protein 
Protein accessionYP_677909 
Protein GI110637702 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0107398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.520158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAG TAATCCTTTA CATCGCAACA AGTTTAGACG GCTATATTGC TAAGCCAAAT 
GACGACCTTG GTTTTCTTTC AATTGTAGAA CAAGAAGGAC AAGACTATGG CTATGCGGAC
TTCGTAAAAA CTGTAGATGC TGTTATTGTT GGGCGCAAAA CTTACGACAA AGTAATTTCT
ATGGGCTTTG ACTTTCCACA CGCAGACAAA GATGCTTATA TCATTACTCG GACACCAAGA
CCAAGTATTG GGTCAATAAA GTTTTATACA GACGATCTTA AATCACTTGT TAACAAACTC
AAATCAGAAA ACGGAAAAAA TATATTTTGT GACGGTGGAG CAGAAATCGT AAGCGAACTT
TTAAAAGATG ACCTTATTGA CGAATTTATT ATTTCCGTTA TTCCAATATT AGTTGGCAAC
GGGACAAAAC TATTCAAAGA CGGAAGACCA GAACAAATAT TAGAACTTAT TTCAACAAAA
CAGTTTGAAA AAGGGCTTAC TCAACTTCAT TACAAACGTG CGGACAAATA G
 
Protein sequence
MRKVILYIAT SLDGYIAKPN DDLGFLSIVE QEGQDYGYAD FVKTVDAVIV GRKTYDKVIS 
MGFDFPHADK DAYIITRTPR PSIGSIKFYT DDLKSLVNKL KSENGKNIFC DGGAEIVSEL
LKDDLIDEFI ISVIPILVGN GTKLFKDGRP EQILELISTK QFEKGLTQLH YKRADK