Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1297 |
Symbol | dfr |
ID | 4184860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1509998 |
End bp | 1510528 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638071291 |
Product | dihydrofolate reductase family protein |
Protein accession | YP_677909 |
Protein GI | 110637702 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0107398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.520158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAG TAATCCTTTA CATCGCAACA AGTTTAGACG GCTATATTGC TAAGCCAAAT GACGACCTTG GTTTTCTTTC AATTGTAGAA CAAGAAGGAC AAGACTATGG CTATGCGGAC TTCGTAAAAA CTGTAGATGC TGTTATTGTT GGGCGCAAAA CTTACGACAA AGTAATTTCT ATGGGCTTTG ACTTTCCACA CGCAGACAAA GATGCTTATA TCATTACTCG GACACCAAGA CCAAGTATTG GGTCAATAAA GTTTTATACA GACGATCTTA AATCACTTGT TAACAAACTC AAATCAGAAA ACGGAAAAAA TATATTTTGT GACGGTGGAG CAGAAATCGT AAGCGAACTT TTAAAAGATG ACCTTATTGA CGAATTTATT ATTTCCGTTA TTCCAATATT AGTTGGCAAC GGGACAAAAC TATTCAAAGA CGGAAGACCA GAACAAATAT TAGAACTTAT TTCAACAAAA CAGTTTGAAA AAGGGCTTAC TCAACTTCAT TACAAACGTG CGGACAAATA G
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Protein sequence | MRKVILYIAT SLDGYIAKPN DDLGFLSIVE QEGQDYGYAD FVKTVDAVIV GRKTYDKVIS MGFDFPHADK DAYIITRTPR PSIGSIKFYT DDLKSLVNKL KSENGKNIFC DGGAEIVSEL LKDDLIDEFI ISVIPILVGN GTKLFKDGRP EQILELISTK QFEKGLTQLH YKRADK
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