| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1274 |
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| Symbol | pdh |
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| ID | 4185973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1484552 |
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| End bp | 1485289 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638071268 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_677886 |
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| Protein GI | 110637679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.885753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.198911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCACAT TAGGAATTAT TGGTTTTGGT GGTTTTGGAC AGTTTATGGT GAAGCATTTG
CAACCCTATA TTTCTGTGAC CGTTCATGAT TTAACAGATC TCTCGCATAT TGCCGCTGAA
CACAAGGTAG AGTGGGGTAC ATTGCAGGAA ACTGCATCTA AAGATATTGT CATACTTGCA
GTGCCGGTTC AGTTTTTAGA ATCCTTATTG CTTGAAATTA AAGACTATCT AAAAGCAGAA
GCACTTATTG TAGACGTTTC TTCTGTAAAG GTAAAACCCA TCGAATTAAT GCTTAAGCAT
CTGCCGCTGA CTGTAGATAT ATTAGGCACA CACCCGCTGT TTGGTCCACA AAGCGGTAAG
AATGGGATTA AGGGGCTGAA TATGGTTGTT TGTCCTGTGC GTTCTAAAAA AATGCGTGCA
ATAACCCATT TTTTACGTAA TGTCATTCAA TTGAACGTGC TTGAACGTAC ACCGGAAACA
CACGATAAAC AAATGGCCTA TGTACAGGCA TTGACACATT TCATCGGCAG ATCAATCAAT
GAAATGGATA TTCCGGATGT AGAACAAAAG ACACCCGCAT ACCAGTATCT GTTAGATATA
AAAAGAAATT TAGGAGGCGA TTCCATGGAT CTTTTTTTAA CGATTGAATT GGAAAATCCA
TATGCAAAAA AAGTACGTGA AGAATTTATG GGCGCGTTGA AAAGTCTGAA TGATCGGTTG
GAACACATTA AAAGATAG
|
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| Protein sequence | MRTLGIIGFG GFGQFMVKHL QPYISVTVHD LTDLSHIAAE HKVEWGTLQE TASKDIVILA
VPVQFLESLL LEIKDYLKAE ALIVDVSSVK VKPIELMLKH LPLTVDILGT HPLFGPQSGK
NGIKGLNMVV CPVRSKKMRA ITHFLRNVIQ LNVLERTPET HDKQMAYVQA LTHFIGRSIN
EMDIPDVEQK TPAYQYLLDI KRNLGGDSMD LFLTIELENP YAKKVREEFM GALKSLNDRL
EHIKR
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